Candidatus Nitrosymbiomonas proteolyticus: NPRO_06830
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Entry
NPRO_06830 CDS
T07108
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
npy
Candidatus Nitrosymbiomonas proteolyticus
Brite
KEGG Orthology (KO) [BR:
npy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npy03400
]
NPRO_06830
Enzymes [BR:
npy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NPRO_06830
DNA repair and recombination proteins [BR:
npy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NPRO_06830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_22
Viral_helicase1
DEAD
AAA_12
CDPS
Motif
Other DBs
NCBI-ProteinID:
BBO23088
UniProt:
A0A809R8W3
LinkDB
All DBs
Position
complement(770232..772541)
Genome browser
AA seq
769 aa
AA seq
DB search
MGVRELLPNLTPEQQSAVEMQSNRFTVRAAAGAGKTRVLVARYLRYVVEVGLRPDQILTI
TFTRKAAAEMKRRIVKTLIEAGLPLEAQVAETGPIQTVHGFCERVLRECAIEAGVDTDFV
VLDEAESARIKEQCLAEAIASARENSPADTLIKKLAGRRKFEISDPSGVLKEAVRTATSA
LRDSGLPRQFWAEIYASPESALRHWQEKWVETMDESLVEELNAQEPSLPFGTRLFRALKQ
LRRRVPKGLTDADGAQASEATERETAADSCGLVEIACASWESFEGKLAAAKALDFSSLEG
RTVALLATSPFVRERLRNQYRVLLVDEAQDLSPMQHRLIETLGIGDEMLVGDAQQSIYGF
RQSDVRLFHSRVETTETVDLSKNHRSVEGVLAYIDATFSALWGTSYLPMRDSPSGPAPFE
GVEIWPLQRRDSEQVARWIADLVAETGRPGDIAVLVRASRFAQELLPRLTQRGVPAQIAG
GTEKFFVRLEVRDIANALLSLYRPEEDVALLSTLRGPFAGVSVDSIALLAQNGHVFEALS
SFEPAVESDKEKIARFLGWFVPLQARVHRLLAFQALAELLAASPYLPNVARKPRAGQVLA
NVKKLLRMAAERPHLDPFDFVDWIREIRELRHKEGDAPATDFDEGAVTLMTIHKSKGLEF
PIVVLPDTHGPMSGRKKEVEVEKTKAILTCRFEAGVSAFHDWNSECRKEREMAEEWRIVY
VAMTRAKERLCVVAHPKSRSQSVAERLAYLTPWDNSRTPGVRVREISPE
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgggggtacgcgagttgcttcctaacctgacccccgagcagcagtcggctgtcgagatg
cagtcgaataggttcacggttcgcgcggccgctggagcgggcaagacccgtgtcttggtg
gcccgctacctgcgctacgttgtcgaagtcgggcttcggccggaccagattctgacgatc
acgttcactcggaaggcggcggcggagatgaagcgccgaatcgtcaagacgttgatcgaa
gctggactgccgcttgaggctcaggtggcggaaacggggccgattcagacggtccacggc
ttctgcgagagggtactgcgcgagtgcgcgatcgaagccggagtcgataccgatttcgtg
gtgctcgacgaggcggagtccgcccgcattaaagagcagtgcctcgcagaagcgattgcc
tcggccagagagaactcgcccgcggacacccttatcaagaagctggcggggcgcaggaag
ttcgaaatcagcgaccccagcggggtgctgaaggaggccgttcgaacggcgacttcggcg
ctgcgggattcgggtttgccccggcagttctgggccgagatctatgccagccccgagagt
gcgctgcgccactggcaagagaaatgggttgagaccatggacgaatccctcgtcgaggaa
ctgaacgcccaggagccttcgcttccgttcggaacccggctttttcgggcgctcaagcag
ctccgaagacgagttcccaagggacttacggacgccgacggcgcgcaagcttccgaggcg
accgagcgagagaccgcggccgacagttgcggccttgtcgagatcgcttgcgcctcttgg
gagagtttcgaaggcaagctcgccgctgcgaaagccctcgacttcagttctctcgaagga
agaacagtcgccctgctcgccacctcgcccttcgttagggagaggctccgaaaccagtac
cgggtcttgctggtcgacgaagctcaagacctcagcccgatgcagcatcggctgatcgag
acgcttgggatcggcgatgagatgctcgtaggggacgcgcagcagtcgatctacggtttt
cgccagtcggacgttcgcttgtttcattcgcgggtcgaaaccaccgaaaccgtcgacctc
tcgaagaatcatcggtcggtcgaaggggttttggcctacatcgacgcgacgttctcggct
ctttggggaaccagctacctgccgatgcgcgattcgccctccggacccgcgccgttcgag
ggagtggagatttggcctctgcagcgccgagactctgagcaggtcgcccggtggatcgcc
gacctcgtcgctgaaacgggtcggccgggcgacatcgccgtgctggtccgagcgagccga
ttcgcgcaggagcttctgccccggctcactcagcgaggggtgcccgcgcagatcgccggg
ggaacggagaagttcttcgttcgattggaggtccgcgacatcgccaacgcgttgctcagc
ctgtatcgcccggaggaagacgtcgcgctgctttcgactttgcgtgggccgttcgccggg
gtctcggtcgactccatcgcgctcctcgcgcaaaacggtcacgtgttcgaggcgctctcc
tcgttcgagcccgcggtggaatccgacaaggagaagatcgcgaggttcctcggatggttc
gttcccctccaggcgagggtccatcggctcttggcgttccaagcccttgcggagctgctc
gctgcctcgccgtacctccccaatgtagcccgcaagccgagggcgggccaggtacttgcg
aacgtcaagaagctcctgaggatggccgcggaacgcccccacctcgacccgttcgacttc
gtggactggatccgcgagattcgcgaacttcggcacaaggaaggagacgcgcccgcaacc
gacttcgacgaaggcgccgtcacgctcatgacgatccacaagtcgaaggggctcgagttc
cccatcgtcgtcctgccagatacccatggcccgatgtcggggcggaaaaaggaggtcgaa
gtcgagaagaccaaggcgatcctgacttgcaggttcgaggccggcgtgtcggcgtttcac
gattggaactcagagtgtcgcaaggagcgagaaatggccgaagagtggcgcatcgtatac
gtcgccatgacgagggctaaggagcggctttgcgtcgtggctcatcccaagtccaggtcc
caaagcgtcgccgagcgacttgcgtacttgacgccgtgggataattcaaggacgcccgga
gttcgagttcgcgagatcagccccgagtag
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