Candidatus Nitrosymbiomonas proteolyticus: NPRO_09340
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Entry
NPRO_09340 CDS
T07108
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
npy
Candidatus Nitrosymbiomonas proteolyticus
Pathway
npy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
npy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NPRO_09340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npy03400
]
NPRO_09340
Enzymes [BR:
npy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NPRO_09340
DNA repair and recombination proteins [BR:
npy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NPRO_09340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BBO23339
UniProt:
A0A809R784
LinkDB
All DBs
Position
complement(1050476..1051330)
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AA seq
284 aa
AA seq
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MSARWIGAHMPTSGGLRLALQRGREIGCTAVQVFTSSPQQWKAKPMADEAVERFQQAQAA
TGIDCVVSHDSYLVNLCATNDEIRAKSIEGLKAEVERCARLGIRWVVSHMGSHLGAGEEA
GLQAVAEGARRVFEETSDSVTLLMETTAGQGSALNYRFEHLATLIESLQGHPRLGVCLDT
CHLFAAGYDLRDRESYEATFSELERWVGLDRVKAIHANDSKKGLGSRVDRHAHIGEGEIG
IEAFRLLVNDPRWIEVPILLETPDAETMHKVNLECLKSLLDPVP
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgcgatggatcggggcgcacatgccgacttcaggggggcttcgtctagctctc
cagcgaggccgggagatcggttgcacggcggtgcaggtgttcacctcgagcccacagcag
tggaaggccaagccgatggccgacgaggccgtcgaacggtttcagcaggctcaagccgca
acgggcatcgattgcgtggtgagccatgattcgtacctggtgaacctctgcgcgacgaac
gacgagattcgggcgaagagcattgagggactcaaggcggaggtcgagcgatgcgcgagg
ttggggatccggtgggtggtctcgcacatgggaagccatctcggcgcaggagaagaggcc
gggctgcaagcggttgccgaaggtgcgcggcgcgtttttgaggaaacttccgactctgtg
acgctcctcatggaaaccaccgccggacaaggcagcgccctcaactaccggtttgagcat
ctcgccacgctcatagaatcgctccagggccatccccgattgggcgtgtgcctggatacg
tgccacctgttcgccgcgggttacgacctccgggaccgagaatcgtacgaagcgacgttc
tccgagttggagcgatgggtcggcctcgaccgcgtaaaggcgattcatgcgaacgactcg
aagaagggtctggggagccgagtcgaccgccacgcccacatcggcgaaggcgaaatcggg
atcgaggcgtttcggcttctcgtcaacgacccccgctggatcgaggttccgatccttctc
gaaacgcccgacgccgaaacgatgcacaaggtcaacttggagtgcctgaagtcgctcctc
gatcccgtcccgtag
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