Candidatus Nitrosymbiomonas proteolyticus: NPRO_11190
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Entry
NPRO_11190 CDS
T07108
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03090
RNA polymerase sigma-B factor
Organism
npy
Candidatus Nitrosymbiomonas proteolyticus
Brite
KEGG Orthology (KO) [BR:
npy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npy03021
]
NPRO_11190
Transcription machinery [BR:
npy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NPRO_11190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
HTH_10
HTH_37
Sigma70_ECF
MarR
Motif
Other DBs
NCBI-ProteinID:
BBO23524
UniProt:
A0A809SE13
LinkDB
All DBs
Position
1239978..1241249
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AA seq
423 aa
AA seq
DB search
MAESLNFEMDPEGIVFRYLENPRPDLKDLILVQYAPMVERVARKFAGIEPLDDLVQVGFI
GLLNALSKFDPEAGVRFNTYATYLVAGEIKHYLRDKAQTIRQPAWLQELRHKVNRATAVL
QSELGREPSEAEIASYLDVAEHTVHEVFQTSEMIRVGSLDSLTGDDDSDAEVDRLDASDY
CPEQLSVEERVVLESAMKQLRDLEREVLVLFHFESLNQTEIAAKLGISCNYVSHILRQSL
SKLRRILSREEENDRILKRQAESLDFDVIDATTGVYTEAYFRTRLEEELHRASGQNGAVA
LVTVRFEGLAHLASFYGQTSVDDFLADAADFLKETVRRLDVVCRLGDAGFAVLLPSTANT
ASLARQRILSRIVAWIASRQVDQQDVKAILGSSSFPVDGKRAATILDKALRPVDIESAGF
QAA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatctttgaacttcgagatggaccccgaggggattgtcttccgctacctggag
aaccccaggccggacctcaaggacttgatcctcgtccagtacgccccgatggtggagcgc
gtcgcgaggaaattcgcgggcatcgaaccgctcgacgacctcgttcaagtgggcttcatc
ggccttttgaacgcgctctccaagttcgaccccgaggcgggagttcgtttcaacacgtat
gcgacgtacctcgtcgccggtgagatcaagcactacctccgcgacaaggctcagacaatc
cgccagcccgcatggctccaggaactgcgccacaaggtgaatcgcgcgaccgcggtgctt
caaagcgagttgggcagggagccctccgaggcggaaatcgcttcgtacctcgatgttgcg
gagcatacggtccacgaggtgtttcagacctccgagatgattcgagtgggatcgctggat
tcgctcacgggcgacgacgattccgacgccgaggtcgatcggttggacgcttcggactac
tgtcccgagcagttgagcgtcgaagagcgagtggtcttggagagcgcgatgaagcaacta
cgggacctcgaacgcgaggtgctcgtcctcttccactttgaatcgctcaaccagacggaa
atcgccgccaagctgggcatctcgtgcaactacgtttcgcacatcctgcgtcaatcgctc
tcgaagctgcggcgtattctcagcagggaggaagagaacgaccgcatcctcaagcgtcag
gctgagagtctcgactttgacgtgatcgatgcgaccacgggggtgtacacagaggcctac
ttccgaacccggctcgaagaagaactgcaccgagcttcaggccagaatggggcggtcgct
cttgtgacggtccgcttcgaggggctggcccacctggcgtcgttctatggacaaacgagc
gtggacgacttcttggcggacgccgccgacttcctcaaggaaaccgtacgccgactcgac
gtggtttgtaggctgggggatgccgggtttgcggtgctccttccttcgacggccaacacg
gcttcgttggctcggcagcgaatcctctctcgaatcgtcgcctggatcgcttcgcggcag
gtggaccagcaggacgtcaaagctatcttggggagttcgtctttcccggtggacggaaaa
cgagccgccacgatcctcgacaaggctctgcgccctgtggacatcgagtctgcggggttc
caagcggcctga
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