Candidatus Nitrosymbiomonas proteolyticus: NPRO_22720
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Entry
NPRO_22720 CDS
T07108
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
npy
Candidatus Nitrosymbiomonas proteolyticus
Pathway
npy03030
DNA replication
npy03430
Mismatch repair
npy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NPRO_22720
03430 Mismatch repair
NPRO_22720
03440 Homologous recombination
NPRO_22720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npy03032
]
NPRO_22720
03400 DNA repair and recombination proteins [BR:
npy03400
]
NPRO_22720
Enzymes [BR:
npy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NPRO_22720
DNA replication proteins [BR:
npy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NPRO_22720
DNA repair and recombination proteins [BR:
npy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NPRO_22720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
Herpes_BLRF2
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
BBO24677
LinkDB
All DBs
Position
complement(2495688..2496755)
Genome browser
AA seq
355 aa
AA seq
DB search
MSFSVEAVFKSRIALFSGEEPYLRLQALRQLHEAMGDDSEFNIEQFIADGSNPEEYITAA
MTLPFLGDRRLIIVRNILRAGQPADALGPLFDQLSKVPDPNTLLFVADDELGDDDKQRRL
ATVRKAWETTITKLGGKTVQFESDESSVKKNLKDHAGQSGKSLTPKAMDLLVEMTGGNLS
RALAELDKLVLYVGDDEQISEAAVKSVVMPSREWNVFKLVGAAVEGNSGEALRQLETLIE
GSGKIEDAVFSRIFPTLSRQLRLIWQARLCVEARCRPSNAPVEVLRMFPTSPNLTKERDW
IQNMALRQAQTLDLDRLSMWMGSIAQTDATLKGLGSAIDAKGALEMLVLQMATRA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctcggtagaagcggtcttcaagagccgaatcgcgctgttttcgggcgaagag
ccctatctgcgcctgcaagccttgcggcagcttcacgaggcgatgggtgacgactctgag
ttcaacatcgagcaattcatcgccgacgggtcaaaccctgaggagtacatcacggcggcg
atgacgttgccgtttctcggagaccgaaggctcatcatcgttcggaacatcctgcgggcg
ggtcaacccgccgacgcgctcgggccgcttttcgatcaactttcgaaggtccccgatccc
aacacactgctcttcgtagccgacgacgaactcggcgacgacgataagcaacggcgcctt
gcgaccgtacggaaggcttgggagaccacgatcaccaaactgggaggcaagacggtccag
ttcgaatcggacgaatcctcggtcaagaagaacctcaaggaccacgcgggtcagtcgggc
aagagcctcacaccgaaggcgatggacctcctggtggaaatgaccggaggcaacctgagc
cgcgcccttgccgaactcgataagctggtcctttacgtaggcgacgacgagcaaatatcc
gaagcggcggtcaagtctgtcgtcatgccctcgcgggagtggaacgttttcaagcttgtc
ggggccgccgtcgagggtaattcaggagaggcgcttcggcagctcgaaacgctgatcgaa
ggctcagggaagatcgaagacgccgtgttttcgcgtatttttccgacgctctcgcggcag
cttcgcctgatttggcaagctaggctttgcgtcgaggcgcggtgccgaccctccaacgcg
ccggtcgaagtgctcaggatgtttcccacgagccccaacctcacaaaggaaagggactgg
attcagaacatggcccttcggcaggctcaaacccttgacctcgatcgcctgtcgatgtgg
atgggatcgatcgctcagaccgacgcgaccctcaaagggttggggtcggcgatcgacgcc
aagggtgccttggagatgctcgtcttgcagatggcgacccgagcctag
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