Candidatus Nitrosymbiomonas proteolyticus: NPRO_22960
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Entry
NPRO_22960 CDS
T07108
Name
(GenBank) UDP-N-acetylmuramate--L-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
K01924
UDP-N-acetylmuramate--alanine ligase [EC:
6.3.2.8
]
Organism
npy
Candidatus Nitrosymbiomonas proteolyticus
Pathway
npy00470
D-Amino acid metabolism
npy00550
Peptidoglycan biosynthesis
npy01100
Metabolic pathways
npy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
npy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NPRO_22960
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NPRO_22960
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NPRO_22960
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
npy01011
]
NPRO_22960
Enzymes [BR:
npy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NPRO_22960
6.3.2.8 UDP-N-acetylmuramate---L-alanine ligase
NPRO_22960
Peptidoglycan biosynthesis and degradation proteins [BR:
npy01011
]
Precursor biosynthesis
Amino acid ligase
NPRO_22960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Mur_ligase_C
Dala_Dala_lig_N
Mur_ligase
Mur_ligase_M
ATP-grasp_3
ATP-grasp
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
BBO24701
UniProt:
A0A809SB27
LinkDB
All DBs
Position
complement(2519564..2521855)
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AA seq
763 aa
AA seq
DB search
MSRTKAEVESGIFAPSHEMQALRPFFLVGIGGAGMSALARLLKGRGMEVEGTDSTPSNET
LLLQELGIEVRIGHSGEGITRRHQVVLSDAIDLDASPEYAAAKKAGCPVFRRSQLLGWLL
KGKRVIAVTGSHGKTTTTGMVAAGLRAVGLDPLIIVGAEVPEFGASVIDGKGDLAVVEAC
EAFESYRDIDPYIVIVTNLESDHLDYHEDFPQLLASVRRFAQKVKSGGAVLFCHEDAGAC
AVAEGIAEAVSYTLFDWTSRLEETSDDPVDAFGLAIPGRYAALDAAAALSAIQRVTPELE
KAIQAIREFRGAERRLQVRREGTITVVDDYAHHPTEIQASIEALRQRYPERRLVLVFQPH
LFTRTRDQLQGFVKALGLADSVVLTDIYPAREDPIPGISSARIAEGLKVPVRYVSSHRLL
PRVVAQVAQPGDLICGMGAGNISEFVPAFLEELDRTGPLRVAVVFGGDSTEREVSLHSGR
AAIDALKKKGYDAYGVDASDLLLSRGDLSQFVGLNRPDVAFLAVHGTHAEDGAIQGLFEL
LHIPYTGSTIQSSAIAMDKQLSKDVLAAHGIPTPAGGLLLSPDEPPPCPGPWVVKPNEQG
STVGLSFVERAEDLPEAVRRALEYGPEALVEQWIEGVEISVPVMGNQALPPVEIVPLSGR
YDFAAKYTPGATDEIVPARLSEEVLERARELAVASDAALGCEGLTRTDMIVDGEDIYVLE
INTLPGLTGTSLAPRSALAAGIAFEDLCDWLVQDALRRNAEKV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaactaaagccgaagtcgaaagcggaatctttgccccctcccatgagatgcag
gcgctgcgacccttctttctcgtggggatcggcggggcagggatgagcgcgctcgcaagg
ctgctgaagggccgggggatggaggtagaaggcacggattccaccccttcgaacgagacg
ctgcttctccaagaactaggcatcgaggtccggatcggccattcgggcgaaggaatcacc
cgcaggcatcaagtggtcctcagcgacgcgatcgacctcgatgcgagccccgaatatgcg
gccgcaaaaaaggcagggtgtcccgtcttccgccgctcgcaactcttggggtggctcctg
aagggtaagcgcgtgatcgccgtcaccgggagccacgggaagaccacaaccacggggatg
gtggctgccggacttcgagccgttggcctcgacccgctgattattgtgggtgcggaggtg
cctgaattcggggcttcggtgatcgacggcaagggcgatttggctgtcgtcgaggcgtgc
gaggccttcgaaagctaccgggacatcgacccctacatcgtcatcgttaccaaccttgag
tccgaccacctggactaccacgaagacttccctcaactgcttgcgagcgtgaggaggttc
gcccaaaaggtcaaatcgggaggagccgtgctcttctgtcacgaagacgcgggcgcttgc
gcggtggcggagggcatcgccgaagccgtctcgtacaccctcttcgactggacctctcga
cttgaagagacgtccgacgaccccgtggacgcttttggcctcgcgattccaggtcggtat
gcggcgctcgatgccgccgcggcgctctctgccattcagagggttactcctgaacttgaa
aaggcgatccaagccatccgggagtttcgcggcgcggagcgtaggctccaggtcaggagg
gaaggcacgatcaccgtcgtcgatgactatgcccaccaccccaccgaaatccaggcgagc
atcgaagcgttgcggcagcggtatccggaaaggcggttggtcctcgtgttccagccccac
cttttcacccggacaagagatcagttgcagggcttcgtaaaggccctcggtctcgcagac
tctgtggtgctcacggacatctacccggcccgcgaggaccccatccctggcatcagctcg
gcccggatcgccgaggggctcaaggtccccgtcaggtacgtttcctcgcaccgattgttg
cctcgggttgtggcgcaggtggcccagcccggtgacctcatttgtgggatgggcgcgggg
aacatctccgagttcgtacctgccttcctcgaagaattggatcgcacaggacccttgcga
gtggcggtcgtattcggtggagacagcacggagcgcgaagtttcgctccactccggaagg
gccgcaatcgatgcgctcaaaaagaagggctacgacgcttatggggtcgacgcttcggac
ctcttgctctcgcggggagacttgagccagttcgtcgggctcaaccgtccggatgtcgcc
ttcctcgccgtacacggcacccacgccgaggatggcgcgatccaagggcttttcgaactc
ctccacatcccgtacacgggttcgaccattcaatcgagcgcgatcgcgatggacaagcaa
ctctccaaagacgttcttgccgcgcacggaatcccgactcctgcgggcggtttgcttctt
tctcctgatgagccccctccatgtcccggtccctgggtggtcaaacccaacgagcaaggc
tcgacggtgggactctcgttcgtcgaacgcgccgaggaccttccggaggccgttcggagg
gctctcgaatacggcccagaagccttggtcgagcagtggatcgagggagtcgaaatctcg
gtgccggtgatgggtaatcaggctcttccgcccgtcgagatcgtgcccttgagcggacgt
tacgacttcgccgcgaagtacacgccgggcgcgacggatgagatcgtccctgcgcgattg
tccgaagaggtcctcgagagggccagggagttggcggtggcttcggacgccgccctcggg
tgcgaaggactgacgcgaacggacatgatcgtcgacggcgaagacatttacgtcctcgaa
atcaacactctgcccggactcaccggaacctcgcttgcccctcgaagcgccttggccgcg
ggtatcgcgttcgaggacctttgcgactggctggttcaggacgccctgcgaagaaatgcg
gaaaaggtctaa
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