Nostoc piscinale: ACX27_13620
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Entry
ACX27_13620 CDS
T09766
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
npz
Nostoc piscinale
Brite
KEGG Orthology (KO) [BR:
npz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npz03021
]
ACX27_13620
Transcription machinery [BR:
npz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACX27_13620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HNH_repeat
HTH_24
FaeA
DUF488-N3a
Motif
Other DBs
NCBI-ProteinID:
ALF53639
UniProt:
A0A0M4TWN8
LinkDB
All DBs
Position
complement(3153661..3154659)
Genome browser
AA seq
332 aa
AA seq
DB search
MKYLSDKSIEVSNTNKKSLSQADLVRSYLHEIGRIPLLSHEQEIKFGKQVQQMMNLLAAK
EKLTVHLQRQPTQSEWAEYVHLSEAELLQQEKQGYQAKEKMIKANLRLVVSIAKKYQKRN
LDFLDLIQEGSLGLERGVEKFEPQRGYKFSTYAYWWIRQAITRAIAEQARTIRLPIHITE
KLNKIKRTQRELAQKLGRTPTTVDIAQALSLEPQQVRDYLLLARQPLSLELRVGPERDTE
LSNMLEDESISPESYADQSFLKQNIQDLLLKLTPQQREILTLRFGLTGGNILSLSQIGEQ
MGISRERVRQIELQALSTLRRHKDKIRGYLAS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctttctgataaatccattgaagtaagcaatacaaacaaaaaatcattgtct
caggctgatttggtgcgtagttatctgcatgaaattggacgtatacctttattaagtcat
gaacaagaaatcaaatttggcaagcaagttcaacaaatgatgaatttattggctgccaag
gaaaaattaactgtgcatttacaacgccaaccaacacagtcagaatgggcggaatatgtc
catctgagtgaagcagaactattgcaacaagaaaagcaaggatatcaagccaaagaaaaa
atgattaaggctaatctgcggctggttgtttcgatcgccaagaaatatcaaaaacgcaat
ttagattttctggatttaattcaagaaggaagcttaggtttagaaagaggtgttgagaag
tttgaacctcaaaggggatacaaattttctacttatgcttattggtggattcgtcaggca
atcacaagagcgatcgcagaacaagcacgcactattcgcctaccaattcatattacagaa
aaactcaataaaattaaacgcactcaacgggaattagcacaaaaattaggtcgtactcct
accaccgttgacatcgcccaagcattatctttagaaccgcaacaagttcgagattatctg
ctgttagcacgccaacccctgtctttagaattacgggtcggccccgaaagagatacagaa
ttatctaatatgctagaagatgaaagcatatctcctgaatcctacgccgaccaaagtttt
ctcaaacaaaatattcaagatttactgttaaaattaactcctcagcaacgagaaatatta
accttaagatttggcttgacaggcggaaatatcctatctttatctcagattggcgaacag
atgggtattagtcgagaacgagtacgacaaatagaactgcaagctttaagcactctacgc
cgacataaagataaaatcagaggctatttagctagttga
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