Nostoc piscinale: ACX27_16980
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Entry
ACX27_16980 CDS
T09766
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
npz
Nostoc piscinale
Brite
KEGG Orthology (KO) [BR:
npz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npz03400
]
ACX27_16980
DNA repair and recombination proteins [BR:
npz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACX27_16980
Archaeal homologous recombinant proteins
ACX27_16980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
Rad50_zn_hook
SbcC_Walker_B
AAA_27
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ALF54146
UniProt:
A0A0M4SY92
LinkDB
All DBs
Position
complement(3936718..3939744)
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPVQLILKNFLSYRDATLDFRGLHTACISGSNGAGKSSLLEAITWAIWGESRASVEDDV
IHAGAKEVRVDFTFQINQQIYRVIRTRIRGATGVLEFQIETPAGFRPLTGKGVRATQDLI
LEHIKLDYDTFINSAYLRQGRADEFMLKRPTERKEILAELLKLTQYDDLEERAKESSRQY
KARAEELERSLEAIKVQLQQREFTEAQRVELEAELNQLQQVQAFENIQLQSLQVVQHQRQ
NWEQQLSFVRQQYQNLTQDCDRLHQEQSSVKTQLAELAAILNQEAEIKNGYAHYQSLQSQ
EEAFAAKFEQHTRATTLRQQKQQQLTQQIHEIERQLQQVQAQLEALAQQEQEIQHTLSKS
GEVEAALGQLNAARRRVVQLDELQMQVSPLLQQRQSLQTYLDRIQASLVARLEQIQATEN
QLQRASQRHPELQQAVMAVAMQIEQMEKERVYLQRVQEKGQERRHFIERLQGQQREYERL
LGELDQKLQMLRNPDAICPLCERPLDEHHWNRVADKTKSEYKETEEQLWVFREQLACTDR
EIQALRQEYRAISQKLSPYDSLREQRGQLAAQLESTSDAEEQLQQLAQEREHLERSLQVG
DYAHDKQQELRKLDEYLQQLNYNEQDHVLARSEVERWRWAEIKQGQIKDALKRQTQLAAR
KPELQATIAQLQTRIQQEQTDSECAQQITALERQITEIGYSAEQHNNLRQAVRQSQGWQL
RYQQLLSAQQQYPQLQGRLQELEAAKTTRLNERQQLASQIDEIVQQLAQSANPIEQIQAL
EQQLAIRRRQLDEQIAKLGRLEQLALQLETLQVQYEEQQQQLQACKKQYRVYHELALAFG
KNGIQALMIENVLPQLEAETNQLLARLSANQLHVQFVTQKAGRSGKSTKKNAKLIDTLDI
LIADAKGTRAYETYSGGEAFRINFAIRLAMAKLLAQRAGAALQLLIIDEGFGTQDAEGCD
RLIAAINAIASDFACILTVTHMPHLKEAFQARIEVHKTQQGSQVRLSV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtacaacttatcctcaaaaacttccttagttaccgtgatgctactttagat
tttcgtggtttgcatacggcttgtatttctggttctaatggtgcgggtaaatcgtctctg
cttgaggcgattacatgggcaatttggggtgaaagtcgtgcttctgttgaagatgatgtt
attcacgctggggcaaaagaagtccgcgttgattttacctttcaaattaatcagcaaatt
tatcgcgtcattcgcaccagaatcagaggtgcaactggtgttttagaatttcaaatagaa
acgcctgctgggtttcgtcctctgacgggtaaaggagtacgggcgactcaggatttgatt
ttagaacatattaaactggactacgatacttttattaattctgcttacttgcgtcaaggt
cgtgcggatgagtttatgctgaagcgcccgacagaacgtaaggaaattttggcagagttg
ttaaaactcacgcagtatgatgatttggaagaacgggcgaaagaatcttccagacaatat
aaagccagggcggaagaattagagcgttctttggaagcgattaaagttcaactgcaacag
cgagaatttacagaagcgcaacgagtagaattagaagccgaactgaatcagctacaacaa
gtacaagcttttgagaatattcaattacaaagtttgcaagttgtccaacatcagcgacaa
aattgggaacaacaactgagctttgtgaggcaacaatatcagaatttaacccaagattgc
gatcgcctccaccaagaacaatcatcggttaaaacccaactggcggagttagccgccatc
ttaaatcaagaagcagaaattaaaaacggttacgcccattatcaaagtctccaatctcaa
gaagaagcttttgcagctaaatttgaacaacacacccgcgccacaaccctccgccaacaa
aagcagcagcaattaactcagcaaattcacgaaattgaaagacaactccaacaagtccaa
gcccaactggaagccttagcacaacaagaacaggaaattcagcacaccctgagtaaatca
ggcgaagtcgaagccgcattaggacaactcaacgccgcccgtcgtcgggtggtgcagttg
gatgaattacaaatgcaggtttcgccattgttacaacagcgtcaaagtttgcaaacttat
ttagatagaatccaagccagtttagtcgccagattagaacaaatccaagctacggaaaat
caactgcaacgcgcctcccaacgccacccggaattgcaacaagctgtcatggcggtggcg
atgcaaattgaacaaatggaaaaagagcgggtttatttgcaacgagttcaagaaaaaggg
caagaaagaaggcactttattgagcgactgcaaggacagcaacgagaatatgagcggtta
ttaggcgaattagaccaaaaattacaaatgctccgcaaccccgatgcaatttgcccattg
tgtgaacgtcccttagatgagcatcattggaatcgggttgctgataaaactaaatcagag
tacaaggaaactgaggagcaactttgggtattccgtgagcaactagcttgtacagacaga
gaaattcaggctttgcggcaagaataccgggcaatttctcaaaaattgtcaccttatgac
tctttgcgagaacaacgcggacaattagccgcccaactagaatcaaccagcgatgcagaa
gaacagttacaacaactggcgcaggaaagagaacatttagagcgatcgctccaagttggt
gattatgcccacgataaacagcaagaactcagaaaattagacgaatatctgcaacaatta
aattacaatgagcaagatcatgtcttagcgcggagtgaagtcgaaagatggcgctgggca
gaaattaaacaagggcaaattaaagacgcactcaaacgccaaacccaactagccgcccgc
aaaccagaattacaagcaactatcgcccaattacaaaccagaattcagcaagaacaaact
gattctgaatgcgcccaacaaatcaccgccctggagcgtcaaattacggaaattggttat
agtgcagagcaacacaataacctacgtcaagccgtccgccaaagtcaaggttggcaacta
cgctatcaacaattactctcagcccaacagcagtatccccaattacaaggcagattacaa
gaactagaagcggcgaaaactacgcggttgaatgaacgacaacaactcgccagccaaatt
gatgaaattgtccaacaattagcccagtctgccaacccgattgagcaaattcaagcttta
gaacagcaattagccatccgcagaagacaactcgatgaacaaattgccaaattggggcgt
ttagaacaactcgcgctgcaactagaaactttgcaagtgcagtacgaagaacaacaacaa
caactgcaagcttgtaaaaagcagtaccgtgtttaccacgagttagctttagcatttggt
aaaaatggtatccaagcattgatgattgaaaatgtgctgccccaactggaagcagagaca
aatcaattactagcgcggttgagcgccaatcagttgcatgtgcagtttgttactcaaaaa
gcaggcagaagcggcaaatctactaagaagaatgccaagttgattgataccttagatatt
ttaattgccgatgccaaaggaacccgcgcttatgagacttactctggcggggaagccttt
agaattaactttgccattcggttagcaatggcgaaattattagcacaaagggcgggggcg
gcattgcaactgttaattattgacgaaggctttggtacacaagatgccgaaggatgcgat
cgcctaattgcagccataaatgcgatcgcctcagattttgcctgtatcctcaccgttacc
cacatgccccacctcaaagaagcctttcaagccagaattgaagtgcataaaactcaacaa
ggttcacaggtaaggttgtcggtgtag
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