Nostoc piscinale: ACX27_22245
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Entry
ACX27_22245 CDS
T09766
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
npz
Nostoc piscinale
Brite
KEGG Orthology (KO) [BR:
npz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npz03021
]
ACX27_22245
Transcription machinery [BR:
npz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACX27_22245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Rv2175c_wHTH
DUF6192
CM_1
Motif
Other DBs
NCBI-ProteinID:
ALF54928
UniProt:
A0A0M4SU11
LinkDB
All DBs
Position
complement(5215522..5216505)
Genome browser
AA seq
327 aa
AA seq
DB search
MPTVNTQTENLNTKFTADMVRTYLREIGRVPLLTREQEIVYGKQVQQMMTLVEAKEALAK
KLHREPSLPEWANHVKQSETDVKQTVAQGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGTLGLERGVEKFDPTRGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKI
KKVQRELAQTLGRSPTPAEIAKELELEPAQIREYLNMARQPVSLDVRVGDNQDTELQEML
EDEGPSPEYYTTQEFLRQDLNTLLAELTPQQREVVALRFGLEDGNELSLAKVGERLNLSR
ERVRQLEHQALAHLRRRRANVKEYVAS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgttaacacccaaaccgaaaacctgaacaccaaattcacggctgatatggtg
cgaacctatctgcgggaaattggtcgtgtgccactgctaacccgtgagcaagaaattgtc
tatgggaagcaggtgcaacaaatgatgacactggtcgaagcaaaagaagctttggcgaaa
aaattgcaccgcgaaccaagcttaccagaatgggcgaaccatgtaaaacaatcagaaacc
gatgtcaaacaaacggtagctcaaggtaaacgcgccaagcaaaaaatgatcgaggcgaac
ttgcgtttggtagtagcgatcgcgaagaaataccaaaagcgtaacatggaatttctcgat
ttaatccaagaaggaacacttgggttagaacgaggcgtagagaaatttgaccccacacgc
ggctataaattctcaacctacgcttactggtggattcgccaagcaattacccgtgcgatc
gctcaacaaggccgtaccattcgcttaccgattcatattaccgaaaaactgaacaaaatc
aaaaaagtgcagcgcgaactagctcagactttaggccgttctccgacacctgcggaaatt
gccaaagaactggaattagaaccagcgcaaattcgggaatatctgaatatggcacgtcaa
ccagtttctttagatgtgcgtgttggtgataaccaagacaccgaactgcaagaaatgttg
gaagacgaaggcccatcaccagagtattacaccacccaagagttcttgcgccaagacctc
aacaccctgctcgccgaactcacaccccaacagagggaagtcgtagccctgcgctttggt
ttagaggatggaaatgaattgtctttggcaaaagtaggtgagcgattaaatctcagccgc
gaacgtgttcgtcaactcgaacatcaagccttagctcatctgcgccgccgccgcgccaac
gtcaaagaatacgttgctagttaa
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