Nostoc piscinale: ACX27_25055
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Entry
ACX27_25055 CDS
T09766
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
npz
Nostoc piscinale
Pathway
npz03410
Base excision repair
npz03430
Mismatch repair
npz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACX27_25055
03430 Mismatch repair
ACX27_25055
03440 Homologous recombination
ACX27_25055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npz03400
]
ACX27_25055
DNA repair and recombination proteins [BR:
npz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACX27_25055
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACX27_25055
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACX27_25055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ALF56546
UniProt:
A0A0M4T294
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All DBs
Position
5871900..5874035
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AA seq
711 aa
AA seq
DB search
MLNRPLPERSQIRRRLPNQRWQIYPQKTDLAGKLAVSINLSPIISQLLINRGIETPAQAQ
AFLEPESIVLPPPLEEFPDLAMSVELLQEAIASQSKIAICGDYDADGMTSTALLLRSLRA
LGAQVDYAIPSRMHEGYGINKRIVEEFHSEGVKLILTVDNGISAYEPIARARELGVKVIV
TDHHDIPQQLPPADAILNPKLIAESSPYRGVAGVGVAYILAVCLAQQLGETRGLIQPMLE
LFTLGTIADLAPLTGVNRRWVKRGLKHLPKSKLPGVQALIQIAGVQAREAGVQGCRGAGE
KNFCESSVLTPHSPLPTPKSLKPEDIGFRLGPRINAVGRIGDPQTVIDLLTTDDMGVALT
RAMQCEQTNTSRQQMCEEIEQEAIAYVESEFIASLPQDRVLVVIQPEWHHGVIGIVASRL
VERYGVPVFIGTYEDAGHIRGSARGIPEFHVFEALEYCRDLLGKFGGHKAAGGFSLPAEN
LELVRSRLIDFANQCLEPQHLKPLLKIDAQANFNQINHQLFQQLNALHPCGIDNPDPVFW
TPNVQVIEQQTVGKGHIKVTLAQTIDDQQYIVKAIAWRWRDYYPLPQRVDIAYKLRENTF
NGNTTIELELVGVRLKKASSQIFYTSSPNPLRATFQHNQRQYTCGIYQNNSFPELRIKNP
EGKILVMQPERTIGLLGTSREAAIEVDVSQPQYDSIIQAALQALSYINAES
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaaccgacctttacctgaacgttcacaaattcgcaggcgcttaccgaatcagcgt
tggcaaatttacccacaaaaaacagatttagctggaaaactggcagtttctatcaatctt
tctcccatcatcagccagttattaattaatcgtggtattgaaacaccagcgcaagcacaa
gcatttttagaaccagaatcaattgttttacctccgcctttagaagaatttcctgatttg
gcgatgagtgtggagttgttgcaagaggcgatcgcatctcaaagtaaaatcgctatctgt
ggcgactatgatgcagacggtatgactagcactgcattattattgcggagtctccgagct
ttaggcgcacaggtagattatgctatccctagtcggatgcacgaaggttacggtatcaac
aaacgcattgtcgaagaatttcacagcgaaggtgtcaagctaattctcactgttgataat
ggtatctctgcttatgaacccatcgctagagccagagaactcggcgtaaaagtcattgtc
accgaccaccacgacatcccgcaacaattacccccagccgatgctatcctcaaccccaaa
cttatcgctgaatcttcaccttatcgcggtgtggctggtgtcggtgtagcttatattttg
gctgtatgtcttgcacaacagctaggcgaaacgagaggtttaattcagccaatgctagaa
ttattcaccctgggaaccattgcagatttagctcctttaactggtgtaaatcgccgttgg
gtaaaacgcggtttgaagcatttaccaaaatctaagttacccggtgtgcaagcgttaatt
caaatcgccggcgtgcaagccagggaagcaggggtgcaggggtgcaggggtgcaggggag
aaaaatttctgcgagtcttctgttcttactccccactccccactccctactcctaagtca
ctcaaaccagaggatatcggctttcgtcttggcccccgaattaatgcagttggacgtatt
ggtgatcctcagacggtgattgatttgctgactacggatgatatgggagttgcactgaca
agagcaatgcagtgtgaacaaacgaacactagccgtcagcaaatgtgcgaggaaattgaa
caagaagcgatcgcttatgtagaatcagaatttatcgcatcgttaccacaagaccgagta
ttagtagttatccaacctgaatggcatcatggtgtaattggaattgtcgcctctcgcttg
gtggaacgttacggtgtgcctgtatttattggtacgtatgaagatgcgggacatatccgt
ggttcggcgcggggaattcctgagtttcatgtgtttgaagcgttggaatattgtcgagat
ttgttaggcaaattcggcggacacaaagcggcgggaggattttctttaccagcagaaaat
ttagaattggtgcgatcgcgtttaattgattttgctaaccagtgtctagaaccgcaacac
ctcaagccactgctcaaaattgatgctcaagctaactttaaccaaatcaatcaccaactg
ttccagcaattaaatgcgctgcatccttgcggtatcgataaccccgacccagttttttgg
acaccaaacgtccaagttattgaacagcaaactgtcggtaaaggtcatattaaagtgaca
ttagcccaaactattgatgatcagcagtatatagttaaggcgatcgcttggcgttggcgt
gattattatcccttaccacagcgagttgatattgcttacaagttgcgcgaaaacactttt
aacggcaacactaccatcgagttagaattagtcggcgtgagattaaaaaaagcctcatct
caaatcttctacacctcgtcaccaaacccactccgagccacatttcaacacaatcaacgg
cagtatacttgtggcatctatcaaaacaattctttcccagaactcagaatcaaaaatcct
gaaggtaaaattctagttatgcagccagaacgcacaatcggcttgttgggaaccagtcgt
gaagcggcaatagaggttgatgtctctcaaccacagtatgattccattatccaagcagcg
ttgcaagcattatcatacataaatgctgagtcatga
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