Novosphingobium resinovorum: BES08_05350
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Entry
BES08_05350 CDS
T04490
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nre
Novosphingobium resinovorum
Pathway
nre03410
Base excision repair
nre03430
Mismatch repair
nre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BES08_05350
03430 Mismatch repair
BES08_05350
03440 Homologous recombination
BES08_05350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nre03400
]
BES08_05350
DNA repair and recombination proteins [BR:
nre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BES08_05350
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BES08_05350
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BES08_05350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
DAGK_cat
Motif
Other DBs
NCBI-ProteinID:
AOR76249
UniProt:
A0A031K216
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Position
1172990..1174789
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AA seq
599 aa
AA seq
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MESRSACVFGIDRSLTGKAWHWRGGNMDLSDDLGRGPAGLEDDIVTQILLSRGVAREDLE
RHRNPSLRAFLPDPSAFRDMDAAAERLAQAVLTGETVTVYGDYDVDGATSAALLILLMRA
LGHPARYYIPDRLLEGYGPSGEALVRIAGEGSSLIVTVDCGAMAHEALDMAHEAGVDVIV
VDHHKCSPVLPRATALVNPNRLDEDDLAASHGHLAAVGVAFLLAVATVRTLRKRGFFENR
REPDLFALLDLVALGTVADVAALHGLNRALVAQGLKVMAKRDNIGMSALIDASRLGRAPT
CSDLGFALGPRINAGGRVGESTLGVRLLTTTDADEARDIAAQLSRLNDERRAIEQAVQEM
AEAQIDRQHNRSVVVCAGDGWHPGVIGIVAGRIKEKTGKPALVIALGADDAGNGKGSGRS
IPGVDLGAAIIAAREAGFLEAGGGHAMACGLTIAPDKLDALSEWLDEHLAADVSRASANR
SVLLDLALSPGGLVPSLVETLESAGPYGMGWPGPRVAVGPVRIVKADVVGADHLRLIVSG
PDGGRFKAMAFRSAETEMGQALLHAAQGRKLWLAGRAKIDDWGSRPAAELHLDDAAFCD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggaatcacgatccgcctgtgtcttcgggatcgaccgctcgctgaccggcaaggcctgg
cactggcgcggcggcaatatggacctctccgatgacctcggcagaggcccggccggtctc
gaagacgatatcgtcactcagatcctgctctcgcgcggcgtcgctcgcgaggatctggag
cgccatcgcaatcccagccttcgcgccttcctgcccgacccctcggcattccgcgacatg
gacgcggcagccgagcggctcgcccaggcggtgctgacgggcgagaccgtgacggtatac
ggtgattacgacgtcgacggcgcaacgagcgcggcgctgctgatcctcttgatgcgagcc
ctcggccatcccgctcgctactatatcccggaccgcctgctcgaaggctatggtccttcc
ggcgaggcgctggtgcgcatcgcgggcgaaggttccagcctgatcgtcaccgtggactgc
ggcgcgatggcgcacgaagcgctcgacatggcgcacgaagcgggtgtcgacgtcatcgta
gtcgaccaccacaagtgctcgcccgtactgccacgtgccactgcgctggtgaaccccaac
cgcctcgacgaggacgacctggccgcttcccacggccacctcgcggccgtcggcgtcgct
tttctcctggccgtcgcgaccgtgcgcacgctgcgcaaacgcgggttcttcgaaaatcgc
cgcgaaccggacctgttcgccctgctcgacctcgtggcactcggaactgtagcggatgtc
gccgcccttcacggcctgaaccgtgcattggtggcacagggtctcaaggtgatggccaag
cgcgacaacatcggcatgtcggcactcatcgacgccagccgcctcggccgggcaccaacg
tgcagcgacctcggtttcgcgctcggcccgcgcatcaatgccggcgggcgtgttggcgaa
tcgaccctcggcgttcgcctcctcaccacgaccgatgccgacgaggcacgcgatatcgcc
gcgcagttgtcccgcctgaacgacgaacgccgcgctattgaacaggctgtacaggaaatg
gccgaagcgcagatcgatcgacagcacaaccgctccgtcgtcgtctgtgcgggcgacggc
tggcacccgggtgtcatcggcatcgtcgcgggacgcatcaaggagaaaaccggcaagccg
gctctcgtcatcgcgctgggggcggacgatgcgggtaacggcaagggctccggccgctcg
atccccggcgtggacctgggcgccgcgatcatcgccgcgcgcgaggccggcttcctggag
gccggcggcgggcacgccatggcctgcggcctcaccattgcgccggataagctggatgcc
ctgtcggaatggctggacgaacaccttgccgccgatgtctcccgcgcgagcgccaatcgc
agcgtactgctcgatctggctctttcccccggcggcctcgtaccctcgctcgtggagacg
ctggagagcgccgggccttacggcatgggctggcccggcccgcgcgtggcggtcggcccc
gtccgcatcgtcaaggcggacgtcgtcggagccgaccacttgcgcctgatcgtttccgga
cccgacggcggacggttcaaggccatggccttccgcagcgccgaaaccgagatgggccaa
gcccttctgcacgctgcacaaggccgcaagctgtggctggccgggcgtgcgaagatcgac
gattggggcagccgcccggcggcggaactgcaccttgatgacgcggctttctgcgactga
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