Entry |
|
Name |
(GenBank) pseudouridine synthase
|
KO |
|
Organism |
nre Novosphingobium resinovorum
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Brite |
KEGG Orthology (KO) [BR:nre00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:nre03009]
BES08_07585
Enzymes [BR:nre01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BES08_07585
Ribosome biogenesis [BR:nre03009]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BES08_07585
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
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Position |
1633055..1634515
|
AA seq |
486 aa
MSKPPSKSSGGRSGGSGRGRDSGSSFGAGPRGGSSRGGASRDGGPRYNAGSGSARGRTGR
DDGHDAPRGDAPRGGRGRREAPRIGSREDFRNEFPRRGSRDGGRDGASRDAGPRDAAARD
GARTGAPRGDRPREDTPRGGSYRSGPGRDGAPRSERAQGGGSRDATYRSGPARDGARSDS
RDGERGYRPRRDDRAFGSDRGPRPARPTGPRPNLKPGAAPRAAAPTPKDPSLPAREGERV
AKLLARAGVASRREVERLIIEGRVTLDDVVIETPSTVLTSLRGVAVDGNPIAEAEGTRLF
LFHKPSGLITAERDPAGRPTIYTALRNALPEGTGRVMPIGRLDLNTEGLLLLTNDGEFKR
QLELPATGVPRTYRARTFGDITQEQLEQLMEGIEVDGVIYGKIDANMERRTGRNQWIEMT
LTEGKNREVRRVLEALGLQVSRLLRTAYGPFRLGDMPKGMAGEVSQRDLENFRKSLPSQN
PSRTQA |
NT seq |
1461 nt +upstreamnt +downstreamnt
atgtccaaacctcccagcaagtcttcaggcggcagatcaggcggctccggccgtggccgc
gattccggttcctctttcggcgcgggtccgcgtggcggctcttcgcgaggcggtgcatcg
cgtgatggcggcccccgctacaacgccggaagcggcagtgcacgtggccgcaccggccgc
gatgacggtcacgacgcgccccgcggcgacgctccgcgcggcggacgcgggcgccgtgaa
gccccccgtatcggcagccgcgaggacttccgcaatgaattcccgcgccgtggctccaga
gacggtgggcgtgacggcgcctcccgcgatgctggtccgcgcgatgccgctgcccgcgat
ggcgcccgtaccggcgccccgcgtggcgatcgtccgcgtgaggataccccgcgtggcggt
tcctaccgcagtggtccggggcgcgacggcgcgccgcgttcagagcgtgcgcaaggcggc
ggatcgcgcgatgcgacctatcgcagcggacctgcacgtgatggcgcccgctccgattcc
cgcgacggcgaacgcggctatcgtccgcgccgcgacgatcgcgcattcggctcggatcgc
ggcccacgccctgcccgcccgaccggcccgcgtcccaacctcaagcccggcgccgccccg
cgcgccgccgcgccgacgcccaaggacccctcgctgcctgcccgcgaaggcgagcgcgtc
gccaagctgctcgcccgcgccggcgtcgccagccgccgcgaggtcgagcgcctgatcatc
gaaggccgcgtcacgctggacgacgtggtgatcgaaacgccctcgaccgtgctcacatcc
ttgcgcggtgtcgcggtggacggcaatccgatcgcggaagccgaaggcacgcgcctgttc
ctgttccacaagccgtcgggcctcatcaccgccgagcgcgatccggcgggccgcccgacg
atctacaccgcgctgcgcaacgccctgcccgaaggcaccggccgcgtgatgccgatcggc
cgcctcgatctcaacaccgagggcctgctgctgctgaccaacgacggcgagttcaagcgc
cagctcgaactgcccgccaccggcgtgccgcgcacctaccgcgcgcgtacttttggcgac
atcacgcaagaacagctcgaacaactgatggaaggcatcgaggtcgacggcgtgatctac
ggcaagatcgacgccaacatggagcgccgcaccggtcgcaaccagtggatcgagatgacg
ctgaccgaaggcaagaaccgcgaagtgcgccgcgtgctcgaagcgctcggcctgcaggtc
agccgcctgctgcgcaccgcctacggccccttccgcctcggcgacatgcccaagggcatg
gcgggcgaggtttcgcagcgcgacctcgaaaacttccgtaagagcctgccgagccagaat
ccttcgagaacgcaggcatga |