| Entry |
|
| Name |
(GenBank) DNA helicase II
|
| KO |
|
| Organism |
nre Novosphingobium resinovorum
|
| Pathway |
|
| Brite |
KEGG Orthology (KO) [BR:nre00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BES08_07600
03430 Mismatch repair
BES08_07600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:nre03400]
BES08_07600
Enzymes [BR:nre01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BES08_07600
DNA repair and recombination proteins [BR:nre03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BES08_07600
MMR (mismatch excision repair)
Other MMR factors
BES08_07600
|
| SSDB |
|
| Motif |
|
| Other DBs |
|
| LinkDB |
|
| Position |
1636473..1638767
|
| AA seq |
764 aa
MFTVNNLQAPSSDPLIDGLNDPQREAVLTTEGPVLMLAGAGTGKTAALTRRLAHLVHSRL
AWPSEILCVTFTNKAAREMRERVGHLIGPAVEGMPWLGTFHAVAAKMLRRHAELVGLQSN
FTIIDTDDQLRLLKQLIQAEGLDEKRWPARQLAGCIDRWKNRGLNPQDLDAGENESYANG
KGQKFYKLYQDRLKAVNACDFGDLLLHMLNILRTHRDVLEQYQNRFKYVMVDEYQDTNQV
QYLWLRLIAQGRQNICVVGDDDQSIYSWRGAEVANILRFEKDFPGAKVIKLEQNYRSTPQ
ILAAASGLIDENTQRLGKTLWTERHAGDKVQVVGVWDGPEEARRVGDEIERLERQGAPLD
QIAILVRAQYQTREFEDRFISIGMKYRIVGGFRFYERAEIRDALAYLRVIAQPADDLAFE
RIYNAPKRGLGAKALEALHRLARNRGIPLSNAAIEIADTDELPARARNTFLALMRDFARW
RDLSATEGPADLLRTVLDECGYTDALQAEKTAEANGRLENLVELARAMEEYDSLGDFLEH
VSLVMDNENAAEEEKVTIMTMHGAKGLEFDNVFLPGWEEGVFPSQRSLDEGGLASLEEER
RLAYVAITRAKKKCTILHAANRRIYGQWTSSIPSRFIAELPEEHVDSETTLSGGASLWRA
QWSEHADPFADVARMQPSRIVTRGPGWQRAAAKEYDASPKRVVESTRSAASFAAKPRSDI
AVGARVFHEKFGYGAVMAQEGNKLEIEFEQAGNKRVLDSFVKPA |
| NT seq |
2295 nt +upstreamnt +downstreamnt
ttgttcacggtgaacaacctgcaagctccctcctctgatccgctgatcgacggcctcaac
gatccccagcgcgaggccgtgctgacgaccgaaggccccgtgctgatgctcgcgggcgcg
ggcaccggcaagacggcggcgctcacccgccgcctcgcccatctcgtgcacagtcgcctt
gcctggccgagcgagatcctgtgcgtcaccttcaccaacaaggccgcgcgggagatgcgc
gagcgggtcggccacctgatcggcccggcggtggagggcatgccctggctcggcaccttc
cacgccgtcgccgccaagatgctgcgccgccacgccgagctggtgggcctgcagagcaac
ttcacgatcatcgacaccgacgaccagctgcgcctgctcaagcagctgatccaggccgag
gggctggacgagaagcgctggcccgcgcgccagctggcgggctgcatcgatcgctggaag
aaccgcggcctgaacccgcaggacctcgacgccggagagaacgaaagctacgccaacggc
aagggccagaagttctacaagctctatcaggaccggctgaaggcggtgaacgcctgcgat
ttcggcgacctgctgctgcacatgctcaacatcctgcgcacccaccgcgatgtgctcgag
caataccaaaaccgcttcaagtacgtcatggtggacgaatatcaggacaccaaccaggtc
cagtacttgtggctacgcctgatcgcgcagggccgccagaacatctgcgtggtcggcgac
gacgaccagtcgatctattcctggcgcggcgccgaagtggccaacatcctgcgcttcgag
aaggacttccccggcgccaaggtcatcaagctggagcagaactaccgctccacgccgcag
atcctcgccgccgcatcgggcctgatcgacgagaacacccagcgcctaggcaaaaccctg
tggaccgagcgccacgcgggcgacaaggtgcaggtcgtcggcgtctgggacgggccggag
gaagcccgccgcgtcggtgacgagatcgagcggctggagcgtcagggcgccccgctcgac
cagatcgccatcctcgtgcgcgcgcagtaccagacgcgcgaattcgaggaccgattcatc
tccatcggcatgaagtatcgcatcgtcggcggcttccgcttctacgaacgcgcggagatc
cgcgacgcgctggcatacttgcgcgtgatcgcccagccggccgacgacctcgcgttcgag
cgcatctacaacgcccccaagcgcggcctcggcgccaaggcgctggaggcgctgcaccgg
ctggcgcgaaatcgcggcattccgctgtcgaacgccgcgatcgagatcgccgacaccgac
gaacttcccgcccgcgcgcgcaacaccttcctcgcgctgatgcgcgacttcgcgcgctgg
cgcgacttgtccgccaccgaaggccccgccgacctcttgcgcaccgtgctcgacgaatgc
ggctacaccgacgcgctgcaggcggagaagaccgccgaggccaacgggcggcttgagaac
ctcgtcgaacttgcgcgcgcgatggaggaatacgacagcctcggcgacttcctcgaacac
gtcagcctcgtcatggacaacgagaacgcggccgaggaggagaaggtcacgatcatgacc
atgcacggcgccaaggggctggaattcgacaacgtgttcctgcccggctgggaggaaggc
gtgttcccctcgcagcgctcgctcgacgaaggcggcctcgccagtctggaggaggagcgc
cggctcgcctacgtcgcgatcacgcgggcgaagaagaagtgcacgatcctgcatgcggcc
aaccggcgcatctacggccagtggaccagttcgatcccctcgcgcttcatcgccgaactg
cctgaggagcatgtcgactccgagacgacgctgtcgggcggcgcctcgctgtggcgggcg
cagtggtcggagcacgccgatcccttcgccgacgtggcgcggatgcaaccctcgcggatc
gtcacgcgcggccccggctggcagcgcgctgccgccaaggaatacgacgccagccccaag
cgcgtggtcgaaagcacccgctccgccgccagcttcgccgccaagccgcgctccgacatc
gccgtgggcgcgcgcgtcttccatgagaagttcggctacggcgcggtgatggcgcaggaa
ggcaacaagctggagatcgaattcgagcaggcgggcaacaagcgcgtgctcgacagcttc
gtgaagccggcgtga |