Novosphingobium resinovorum: BES08_09395
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Entry
BES08_09395 CDS
T04490
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nre
Novosphingobium resinovorum
Brite
KEGG Orthology (KO) [BR:
nre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nre03032
]
BES08_09395
03400 DNA repair and recombination proteins [BR:
nre03400
]
BES08_09395
Enzymes [BR:
nre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BES08_09395
DNA replication proteins [BR:
nre03032
]
Prokaryotic type
DNA Topoisomerases
BES08_09395
DNA repair and recombination proteins [BR:
nre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BES08_09395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
KAAG1
Choline_bind_3
THDPS_N_2
Motif
Other DBs
NCBI-ProteinID:
AOR76939
UniProt:
A0A1D8A496
LinkDB
All DBs
Position
complement(2017217..2018224)
Genome browser
AA seq
335 aa
AA seq
DB search
MLMTRQTISRLKFADDGAPGITRRPVRGSKWAYFDADGARIKDRAEIDRLNAIALPPAYE
RCWFSADPEVHLLATGYDARGRKQYRYHPDWRQSRETMKFDRCALFGDALPVLRARVDAD
IASRKLTRERAIASVVALLDTGAIRVGNECYAKANKSFGATTLRNRHAKIERGALMLRFK
GKSGKLQQITCDDPGLVRCVRKMQDLPGQHLFQYVDEEGEAIPVHSHDVNAYLAETMGEG
FTAKHFRTWAASTMAFAMLVGNPGLSLRAMLDEVAQCLGNTPAIARKSYVHPDVIAAAKG
DRGAPEVPESLPRKTRWMSREERGLLAFLTSSFRT
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgacgcgccagacgatttcgcgcctgaaattcgccgatgacggcgcccccggc
atcacccgcaggccggtgcgcggcagcaagtgggcctacttcgacgcggacggagcgcgg
ataaaggatcgcgctgagatcgaccggctcaacgccatcgccctgccgcccgcctacgag
cggtgctggttctccgccgaccccgaggtacatctgctggcgaccggctacgatgcgcgc
gggcgcaagcagtatcgctatcatcccgactggcgccagtcgcgcgagacgatgaagttc
gaccgctgcgccctgttcggcgatgcgctgccggtgctgcgggcgcgggtggacgcggac
atcgcttcacgcaagctgacgcgcgagcgggcgatcgcctcggtcgtggcgctgctcgat
accggggcgatccgggtggggaacgagtgctacgccaaggccaacaagagcttcggggcg
accaccctgcgcaaccggcacgcgaagatagagcgcggcgcgctgatgctgcgcttcaag
ggcaagtcgggcaagctgcagcagatcacctgcgacgatcccggcctcgtgcgctgtgtg
cgcaagatgcaggacctgcccggccagcacttgttccagtacgtcgacgaggagggcgag
gcgattcccgtccacagccacgacgtcaacgcataccttgccgagacgatgggcgagggc
ttcaccgccaagcacttccggacatgggcggcgagcacgatggccttcgcgatgctggtc
gggaaccccggcctgtcattgcgggcgatgctggacgaggttgcgcagtgcctcggcaat
acgcccgcgatcgcgcggaagtcctacgtccacccggacgtgatcgcggcggccaagggc
gatcggggcgcacccgaggtgcccgaaagcctgccgcgcaagacccgctggatgagccgc
gaggagcgcgggttgctggcgtttctcacttcgtcgttccggacctga
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