Novosphingobium resinovorum: BES08_15655
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Entry
BES08_15655 CDS
T04490
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nre
Novosphingobium resinovorum
Pathway
nre00300
Lysine biosynthesis
nre00470
D-Amino acid metabolism
nre01100
Metabolic pathways
nre01110
Biosynthesis of secondary metabolites
nre01120
Microbial metabolism in diverse environments
nre01230
Biosynthesis of amino acids
Module
nre_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nre00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BES08_15655
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BES08_15655
Enzymes [BR:
nre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BES08_15655
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AOR78028
UniProt:
A0A1D8A7D9
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All DBs
Position
3363176..3364435
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AA seq
419 aa
AA seq
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MDHFAITDGAMNAEQVPLAEIAREVGTPVYVYSRATLSRHARVFREALSALPSIHIAFAV
KSNPNLAVLRLLAKEGYGADVVSEGEMNRALAAGMKAGDVVFSGVGKTRAELIAAVRAGI
GQFNLESEEEGVELSEIAAELGARATCTLRVNPDVDARTHAKISTGKAENKFGVAYDRAA
GIYERLSALPGLEMRGLAVHIGSQISDLEPSRQAFIKMGALMETLRSQGLTVTHMDLGGG
LGVPYKATDDLPTPADYGRMVAEVAGDWGVTLMFEPGRVITGNSGVLVTEVVRVKQGTTN
PWIVVDAAMNDLARPAMYDAWHDFAAVHPSGETMTANIVGPICESSDTFAMAREIDVVKA
GDLGVFRTAGAYGATMANTYNSRALVPEVMVDGDKWALVANRIEPATILAAEQVPAWLD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttgcaatcacagacggcgcgatgaacgccgaacaggtgccgctggccgaa
atcgcccgcgaagtcggcacccccgtttacgtctattcgcgcgccacgctctcgcggcac
gccagggtcttccgcgaagcgctctccgcgctgcccagcatccacatcgccttcgcggtg
aagtccaacccgaacctcgccgtcctgcgcctgctggccaaggaaggctacggcgcggac
gtcgtctccgaaggcgagatgaaccgcgcgctggcggcgggcatgaaggccggggacgtg
gtgttctccggcgtcggcaagacgcgcgccgaactgatcgccgccgtgcgcgccgggatc
ggccagttcaatctcgagagcgaggaagagggcgtcgaactttccgagatcgctgcggaa
ctgggcgccagggccacctgcaccctgcgtgtaaatccggacgttgacgcacgcacgcac
gccaagatctcgaccggcaaggccgagaacaagttcggcgtcgcctacgaccgcgcggca
gggatctacgaacgcctctcggcgctgccggggctggagatgcgcggccttgccgtccac
atcggcagccagatcagcgacctcgaaccctcgcgtcaggcgttcatcaagatgggtgcg
ctgatggagacgctgcgttcgcagggcctgaccgtcacccacatggatctcggcggcggt
ctcggcgtgccttacaaggcgaccgacgacctgccgacgcccgcagactatggccgcatg
gtggccgaggtcgccggcgactggggcgtcaccctgatgttcgagccgggccgtgtcatc
accggcaactcgggcgtgctcgtgaccgaagtggtgcgcgtcaagcagggcacgacgaat
ccgtggatcgtcgtcgatgcggcgatgaacgacctcgcccgcccggcgatgtacgatgcc
tggcacgacttcgcggccgtgcacccctcgggcgagacgatgaccgcgaacatcgtcggc
cccatctgcgaaagctccgacacgttcgccatggcgcgcgaaatcgacgtggtgaaggcg
ggtgacctcggcgtgttccgcaccgccggtgcctatggcgcgacgatggcgaacacctac
aacagccgcgcgctggtgcccgaggttatggtcgacggcgacaagtgggcgcttgtcgcc
aaccgcatcgaacctgccacgatcctcgccgccgagcaggttccggcctggcttgactga
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