Novosphingobium resinovorum: BES08_25815
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Entry
BES08_25815 CDS
T04490
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
nre
Novosphingobium resinovorum
Pathway
nre03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BES08_25815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nre03400
]
BES08_25815
DNA repair and recombination proteins [BR:
nre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BES08_25815
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Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AOR80938
UniProt:
A0A1D8AFQ2
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Position
pSA2:complement(160758..161651)
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AA seq
297 aa
AA seq
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MAARPYWKGQIRLALVSIPVEIYSATKSGATIAFNQIHEPSGKRIKYEKVVPGIGPVDLD
EIVKGFEYAKGEYVLLDEKEIEGVKLESKKTLELTQFVDSHDIDPIYFEKPYYVVPADDL
AEEAFIVLREALRRSRKIGLGQLAMRGREYVVSIKACGRGMVMETLRYADEVNKAASYFR
EIGDGDPDDELLDLATTLIDKKTGKFDAADFHDRYVDALKDLIERKKKGKTLNIDADDSE
ADTRGSNVVDLMAALKKSLGSGDAKPAGKKAPAKKATKGAAKEPATKSPPKTTRKRA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaagaccttattggaaaggccagattcgactggctctggtttcaatccccgtc
gaaatctattcggcgaccaaaagcggcgcgacgattgcgttcaatcagattcacgagccg
tctggcaaacgcatcaaatatgagaaggtcgtgcccggcatcggcccggtcgacctcgac
gagatcgtcaaaggctttgaatatgccaagggcgaatatgtcctgctcgatgagaaagag
atcgagggcgtcaagctggagagcaagaagaccttggagctgacccagttcgtcgacagc
cacgacatcgacccgatctattttgaaaaaccctattatgtcgttcccgcagacgatctg
gcagaagaagccttcatcgtactgcgcgaggcgcttcgccgcagccggaaaatcggactt
ggtcagcttgcgatgcgcgggcgggaatatgtcgtcagtataaaggcctgcggacgggga
atggtgatggaaaccctgcgttatgccgatgaggtgaataaggcggcgagctatttccgc
gaaatcggcgacggcgatcccgatgacgagcttctcgatctcgccaccaccctgatcgac
aagaagaccggaaagttcgatgccgccgatttccatgaccgctatgtcgacgcgctgaag
gatctgatcgagcgcaagaagaagggaaagaccctcaacatcgacgcggacgatagcgaa
gctgatacgcggggtagcaacgtcgtcgatctgatggcggcgctcaagaaatcgctcggc
agcggcgatgccaagcccgctgggaagaaggcacccgccaaaaaggcaacgaagggcgcc
gccaaggagccagcgacgaaatccccgccgaagacgacgcgcaagcgggcataa
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