KEGG   Novosphingobium resinovorum: BES08_29185
Entry
BES08_29185       CDS       T04490                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
nre  Novosphingobium resinovorum
Brite
KEGG Orthology (KO) [BR:nre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nre03032]
    BES08_29185
   03036 Chromosome and associated proteins [BR:nre03036]
    BES08_29185
   03400 DNA repair and recombination proteins [BR:nre03400]
    BES08_29185
DNA replication proteins [BR:nre03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BES08_29185
Chromosome and associated proteins [BR:nre03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BES08_29185
DNA repair and recombination proteins [BR:nre03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BES08_29185
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2 DUF2267
Other DBs
NCBI-ProteinID: AOR80870
UniProt: A0A1D8AFJ2
LinkDB
Position
pSA2:complement(892413..892688)
AA seq 91 aa
MNNSDLADAIANDAGITKADARKIVDAVFVAIGDAAAKGDEISLNGFGKFKIKDTPEREG
RNPATGEAMTIKAARKLTFAPAKAVKDKLNG
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaacaacagtgatctcgccgacgccatcgcgaacgatgccggtatcacgaaggccgat
gcccgcaagatcgtcgatgctgtcttcgtcgcgatcggcgacgctgcggccaagggcgat
gaaatctcgctcaacggcttcggcaagttcaagatcaaggacacacccgagcgcgaaggc
cgcaatccggcaaccggcgaggcgatgacgatcaaggccgcccgtaagcttacctttgcc
ccggccaaggcggtcaaggacaagctgaacggatga

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