Novosphingobium resinovorum: BES08_29930
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Entry
BES08_29930 CDS
T04490
Name
(GenBank) AAA family ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
nre
Novosphingobium resinovorum
Brite
KEGG Orthology (KO) [BR:
nre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nre03400
]
BES08_29930
DNA repair and recombination proteins [BR:
nre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
BES08_29930
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Gene cluster
GFIT
Motif
Pfam:
DUF87
HTH_11
AAA_30
AAA_16
TrwB_AAD_bind
HTH_20
MarR_2
HTH_10
AAA_19
HTH_Crp_2
GntR
Sigma70_r4
Sigma70_r3
AAA_22
AAA_10
Motif
Other DBs
NCBI-ProteinID:
AOR81104
UniProt:
A0A1D8AG73
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Position
pSA3:99442..100656
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AA seq
404 aa
AA seq
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MSNVVKLPGPPAPPRCAVPIGQTVYGALELDLDRVLAGRMLVQGGSGAGKSQTMRRIVEE
AFDYVQTMIVDPEGEFGNLAAHIGATTLKAAEIAADGLTAAATRARHHRIALHLDLTDLD
PEQRIIKASAFFAGLVGAPREDWKHTVLVAIDEGHLLAPHQAGSARDAETRRLGVATLTD
LCARGRKRGIAPIIATQRLAKLSSSVVSELQNFLIGINVFDRDIIRAADILGFSRSEAEK
LRTLRAGEFYAFGPALTRTPIMAKIDQTITEHLGATPQLHGAADLDHSEAEKLLDLEHLR
EAPSQRDDSLKSRGSRALDAFLLDPIAPTATAICLALKGISPNATTANELAKHLGISREA
VDQALDVLSALSAVDTMPRADDRMARLHTRLRARLSDVHLVGLS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgtcgtgaaactgccgggaccgccagcgccgccgcgctgcgcggttcctatc
ggccaaaccgtctatggcgccctcgaactggatctcgaccgcgtccttgcgggacgcatg
cttgtccagggcgggtccggtgccggcaagagccagaccatgcgccgcatcgtcgaagag
gctttcgactacgttcagaccatgatcgtcgatcccgaaggcgagttcggcaatctcgcc
gcgcacatcggcgcgacgacgctcaaggcagctgaaatcgcggccgatggcctgaccgcc
gccgcaacgcgcgcgcgtcaccatcgtatcgcccttcatctcgatctcaccgacctcgac
cccgaacaacggatcatcaaggcatcggccttcttcgccggtctcgtcggtgctccgcgc
gaggactggaagcacacggttctcgtcgcgatcgacgaaggacacctgcttgccccccat
caagccggttccgcccgcgatgcggaaacccgccgtctcggcgtcgccacgctcactgac
ttgtgcgcccgaggccgcaaacgcgggatcgcgcccatcatcgcgacccagcgccttgcc
aagctctccagctccgtcgtctccgagcttcagaacttcctcatcggcatcaatgtcttc
gaccgcgacatcatccgcgccgccgacattctgggcttcagccgcagcgaagccgaaaag
ctgcgtaccttacgcgccggcgagttctacgccttcggccccgcgctcacccgcaccccg
atcatggccaagatcgaccagaccatcaccgagcatctcggcgccacccctcagctgcat
ggcgcggccgacctcgaccactccgaggctgagaaactcctcgacctcgagcatcttcgc
gaagcgcccagccagcgcgacgacagcctgaagtctcgcggcagccgcgccctcgatgcc
ttcctgctcgatcctatcgcacccacggccacggcaatctgcctggcgctgaaagggatt
tcgcccaacgccacgacggccaacgaactggccaagcacctcggcatctcgcgcgaggcc
gtggatcaggcgctggacgtcctctccgcgctttcggcggtggataccatgccccgggcc
gatgatcgcatggcgcgcctccatacgcggctgcgcgcccgtctcagtgatgtgcacctg
gtgggtctgtcatga
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