Nitratireductor rhodophyticola: T8J41_02520
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Entry
T8J41_02520 CDS
T09622
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
nrh
Nitratireductor rhodophyticola
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nrh02000
]
T8J41_02520
01504 Antimicrobial resistance genes [BR:
nrh01504
]
T8J41_02520
Transporters [BR:
nrh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
T8J41_02520
Antimicrobial resistance genes [BR:
nrh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
T8J41_02520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
DUF6476
CLE
Motif
Other DBs
NCBI-ProteinID:
WPZ14717
LinkDB
All DBs
Position
complement(540730..543873)
Genome browser
AA seq
1047 aa
AA seq
DB search
MQRFNLSQWAVTHQTLVLFLIIVLSLGGAYSYARLGRAEDPSFTIKVMVVNAIWPGATAE
EVQRQVADPIEKTLQEVPYFDKVRTYSKPGSTFMQVQLEDTTPPGEVADIWYQIRKRVGD
IRASLPQGVIGPFFNDEFGDVDSALYMLTGDGATMRDLKDAAEDIRQRLLRVPDVEKVRF
YGAQDERIFVEFSHSKLATLGIDPQVIFNSIAAQNAVTPSGEIETASDRVFLRVEGALKG
VEAVASVPVAVNGTVFRLGDIADVRRGYEDPPTFTARHEGQQALAIGVVMAEGANILTLG
ENLDQAMDGIKADLPVGLELDMIANQPEVVQDSVGEFIKVFLEALAVVLAVSFLSLGWRT
GIVVALAVPLVLAIVMIVLDILGMSLERITLGALIIALGLMVDDAIIAVEMMVVKMEQGY
DRLKAATFAWTSTAFPMLTGTLVTAAGFLPVGFAQSTAGEYAGGIFWVVGIALVASWFVA
VIFTPYIGVKLLPDFHKHGAAVAEGGDHHDIYDTRLYNALRRIVDWCVSWRWVVIAAVIG
LFAISIWSFGFVQQQFFPTSPRPELMVEIRLPEGAPIKATEASARAMEEVVAADEEVLTY
STYTGAGAPRWFLASNPELPKPNYAIIVMYTEDAAARDRVKERLQTYIADGGLPEARVRV
TELVFGPPVGFPVQFRVIGPDPLEVRRIAYEVRDVMAQNPNALDPNLDWNEQAKSIRLEV
DQDRARALGLTPQDIGRTLQTLLSGLTVTSVRDGIEQVDVVARAVESERLDIEHLGDLTI
ATRGGAPVPLSQVARVVYGHEEPILWRQNRDMLITVRADVPAGVQPPDVSSQIWPTLQPL
IEDLPVGYRIEMGGAIEESAKANAALFDVFPIMVLAMLTILMIQLQSFSRLALVFATAPL
GLIGAAFGLLIFNQPFGFVALLGLIALAGMIMRNTVILVDQIKADLEDGLPEWTAIIEAT
VRRTRPVVLTALAAILAMVPLSSNVFWGPMAFAIMGGLTAATVLTILFVPALYAAFYRVR
RPGAEQGADAGASLQDNEQLALPQAAE
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtttcaacctttcgcagtgggccgtcactcaccagacgctcgtcctgtttctg
atcatcgttctttcgctgggcggagcctattcctatgcgcggctcggtcgtgcggaggat
ccgagctttacgatcaaggtgatggtggtgaatgccatctggccgggcgccacggccgag
gaggtgcagcgacaggtcgccgacccgatcgagaagacgctgcaggaagtgccctatttc
gacaaggtgcgcacctattccaaaccgggctccaccttcatgcaggtgcagcttgaggac
acgacaccgccaggtgaggtggccgacatctggtatcagatccgcaagcgtgtcggcgac
attcgcgcgagcctcccgcagggcgtgatcggccccttcttcaacgacgaattcggcgat
gtggacagcgctctctacatgctgaccggcgacggcgcgacgatgcgcgatctgaaggac
gcggcggaagacatccgccagcggcttctgcgggtgccggatgtggagaaggttcgcttc
tacggcgctcaggacgagcgcatatttgtcgagttctcccattccaagcttgccactctg
ggcatcgacccgcaggtgatcttcaattccatcgcggcacagaatgcggtgacaccttcg
ggcgagatcgagacggcatccgaccgggtgttcctgcgcgtggaaggagcgctgaagggc
gtggaagccgtggcttctgtgcctgttgccgtaaacggcaccgtgttccgtcttggcgat
atcgccgatgtccgtcgcggctatgaagacccgccgaccttcaccgcacgccatgaggga
cagcaggcgctcgccattggcgtggtcatggccgaaggcgcgaacattctcaccctgggc
gaaaatctcgatcaggcaatggacgggatcaaggccgatcttccggtcggtctggaactc
gacatgatcgccaaccagccggaagtcgtgcaggactccgtcggcgagttcatcaaggtg
tttctggaagcgctggccgtggtgctggcggtgagcttcctgtcgcttggctggcgcacg
ggcatcgtggtggcgctggcggtgccgctggtgctggccatcgtgatgatcgtgctcgac
attctgggcatgagcctggaacgcatcacgctcggcgcgctcatcatcgcgcttggtctt
atggtggacgatgcgatcatcgccgtcgaaatgatggtggtgaagatggagcagggctat
gaccggttgaaagcggcgaccttcgcctggacctccacggcctttcccatgctcacgggg
acgctggtgacggcggcgggctttctgccggtcggtttcgcgcagtcgacggcgggcgaa
tatgccggcggcattttctgggttgtcggcattgcgctggtggcgtcgtggttcgtggcg
gtgatcttcacgccctatatcggcgtcaagctcctgcccgattttcacaaacacggcgct
gccgtggcagaggggggcgatcatcacgatatctacgacacgcgcctctacaacgcgctg
cgccggatcgtcgactggtgtgtgtcatggcgctgggtggtcatcgctgcggtgatcggg
ctcttcgccatctcgatctggtctttcggatttgtccagcagcagttcttcccgacctcg
ccccgccccgaactgatggtggaaatccgcctgccggaaggcgcgccgatcaaggccacc
gaggcttcggcccgggcaatggaagaggtggttgcggctgacgaagaggtgctgacctac
tccacctacacgggcgcgggagccccacgctggttcctcgcttccaacccggagctgccg
aagccgaactacgccatcatcgtgatgtacacggaagatgcggcagcgcgcgaccgggtc
aaggagcggctgcagacctacatcgccgatggcggtctgcccgaagcgcgggtgcgcgtc
acagaactggtgttcggtccgcccgtgggcttccccgttcagttccgtgtcattggtccg
gacccactggaggtacgccgcatcgcctacgaggtgagggatgtgatggcgcagaatccc
aatgcgcttgatcccaatctggactggaacgaacaggcgaagtccatccggcttgaggtc
gatcaggaccgtgcgcgggctctcggcctgacgccgcaggatattggccgcacgctgcaa
accctgctttcaggcctgacggtgacctcggtccgcgatggcatcgaacaggtggatgtt
gtggcgcgcgcagtggagagcgaaaggctcgacatcgagcatctgggcgacctgacgatt
gccacgcgcggcggcgcgccggtgccgctctcgcaggtggcgagggtggtctatggccat
gaagaaccgatcctgtggcggcagaaccgcgacatgctgatcacggtgcgcgccgacgtt
ccagccggcgtgcagccgccggatgtctcctcacagatatggccgacccttcagccgctg
atcgaggacctgccggtgggctaccgcatcgaaatggggggcgccatcgaggaaagcgcc
aaggcgaacgctgccctgttcgatgtgttcccgatcatggtgctggccatgctcaccatc
ctgatgatccagctccagagcttctcgcggctcgccctggtttttgccaccgccccgctc
ggtctcatcggcgcggcgttcgggctgttgatcttcaaccagcccttcggcttcgttgcc
ctgctcgggctgatcgcgcttgccggcatgatcatgcgcaacacggtgatcctggtcgat
cagatcaaggcggatcttgaagacgggttgcccgaatggaccgcgatcatcgaggcgacg
gtgcgccgcacacggcccgtggttctgacggcgcttgccgccatcctcgccatggtgccg
ctctcgagcaatgtgttctgggggccgatggcctttgccatcatgggcggtctgaccgcc
gcgacggtgctgacgatcctgttcgtgccggcgctttacgccgccttctaccgcgtccgg
cggccgggcgcggagcagggggcagatgccggtgcgtcacttcaggacaatgaacaactc
gcgctgcctcaggcagccgagtaa
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