Nitratireductor rhodophyticola: T8J41_02725
Help
Entry
T8J41_02725 CDS
T09622
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
nrh
Nitratireductor rhodophyticola
Pathway
nrh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
T8J41_02725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nrh02000
]
T8J41_02725
02044 Secretion system [BR:
nrh02044
]
T8J41_02725
Transporters [BR:
nrh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
T8J41_02725
Secretion system [BR:
nrh02044
]
Type I secretion system
Adhesin protein transporter
T8J41_02725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
WPZ14758
LinkDB
All DBs
Position
complement(598886..601063)
Genome browser
AA seq
725 aa
AA seq
DB search
MEQLRNNPVAGTPLQAGSFRFAFREIAQFLARPSSETVLFSDTPFDEESPSLEDIERLSA
RIGLEVEQHSRRELAGGALDLPVLVVFGDGTAQALLEPLPNDHLRTTLLPDPIAEEGIAL
KDVLSRNIRLILSFSVIYLNQSEGTDSTQAKRIEKRHWLTTTLAPFWKSYAQVAIAALFV
NLLALASPLFVMNVYDRVLPNQATATLWVLALGVAGAILFDLLLKSVRAALIDYAGRKAD
LKLSYLLFEKVLHATMASRPMSTGEYANRVTQYEFVREFFTSNTISTLIDSVFVFVFIAV
IYTVAGWLAVIPATAFAFALIIGLIAQSRIGRRVAAANNEAAQRQSLLVETISTIETVKS
LRAERTLLRRWSELAKNASRTAEGIKQLSAWAANMTQFVQQLVTVALVVAGAYEFSEGNI
STGAIIATVMLSGRAVAPLGQIAMTLSRMRQALLSLRILNTIMEQPEDRPESAGFVNREI
RSGDVDFRNVGFTYPEAASPALVDFNLSVKGGERVGIIGRIGSGKTTAGRLLAGLYPPSS
GNLLLDGVDIRQYHPSVVRSAVVFTSQSADLFSGSVKENLLMAKPGATDDELMAAAEAAG
VDAFVARHPRGYDMPVGERGSQLSGGQRQAVAIARVLLSDPRVVFMDEPSGAMDLASERE
LIARMKTAFREDVTLIISTHRHSMLQLVDRLVVIDQGRVIADGPKERVIEELQKNAGGGR
SGRKQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtggaacagctccgcaataatcccgtggcaggcacgccgcttcaggcaggcagtttcagg
tttgcctttcgggagattgcgcagtttctggcgcgtccgagttcggaaacggtcctgttc
tcggacactcctttcgatgaagaaagcccgtcccttgaggatatagagcgcctttcagcg
cgcatcgggcttgaggtagagcagcacagccggcgcgaactggccggtggcgcgctcgat
ctgccggtgctcgtcgttttcggagacggcacggcacaggcgctcctcgagccgttgccc
aacgatcacctgcgcaccacgcttctccccgatccgattgcggaagaaggcattgcgctg
aaggacgtcctctccaggaacatccggctgatcctttctttcagcgtcatttatctgaac
cagtccgaaggcacggactcgacccaggcaaagcggatcgaaaagcgccactggctcacg
acgacgcttgcaccgttctggaaatcctatgcccaggtcgccatagcggcactctttgtc
aatctgcttgcgctggcctcgcccctgttcgtcatgaatgtctatgaccgggtgctgccc
aatcaggcgacggccacgctctgggttctggcgctgggcgtcgcaggcgcgatccttttc
gacctgcttctgaaaagcgtgcgcgcggcactgatcgactatgccggccgcaaagccgat
ctcaaactgtcctaccttctgttcgagaaggtgctgcatgccacaatggcttctcgcccg
atgtcgacgggcgaatatgccaatcgggtcacgcagtatgagttcgtgcgcgaattcttt
acctcgaacacgatcagcacgctgatcgacagcgtcttcgtcttcgtgttcattgccgtc
atttacactgttgccggctggctagcggtcattcccgcgacggcattcgcctttgccctg
atcatcggtctgattgcccagtcccggattggccggcgtgtggcggctgccaacaatgag
gccgcgcaacgccagtctcttctggtggaaacgatctccaccatcgagaccgtgaaatcc
ctccgcgccgagcgcactttgctgcgccgctggagcgaactggccaagaacgcgtcgcgt
accgcggagggcatcaagcagttgtccgcatgggcagcgaacatgacgcagttcgttcag
cagcttgtgacggtcgcgctggtggtcgccggtgcctatgaattctctgaaggcaatatc
tcgaccggtgcgatcatcgcaacggtcatgctgtcgggccgtgcggtcgcgccgcttggc
cagatcgcgatgacgctctcacgcatgcgtcaggcgcttttgtcgctgcgcattctcaac
acgatcatggaacagccggaggatcggccggagagtgcggggttcgtcaatcgcgagatc
cgctccggtgacgttgactttcgcaatgtggggttcacctatcccgaggcagcaagcccg
gcgctggtggatttcaatctctcggtcaagggcggtgaacgagtcggcattatcggccgg
atcggatcgggcaagaccacggctggcaggctgctggcaggcctctatccgccatcgagc
ggcaacctgcttctggatggcgtcgacatccgccagtatcatccctctgtcgtgcgttcc
gccgtcgttttcacctcgcagagcgcagacctcttttcgggttcggtgaaggaaaacctc
ctgatggcgaagccgggcgcaacggacgatgagctgatggccgccgccgaggctgccggt
gtcgacgcttttgtcgcgcgccatcccagaggctacgacatgccggtgggcgagcgtggc
agccagctttcgggcggacagagacaggcagtcgccatcgctcgtgttctgctcagcgat
ccacgggtcgtgttcatggatgagccgtcgggagccatggatctggcgagcgagcgcgag
ctcatcgcccggatgaaaacggccttccgcgaagacgtgacgctgatcatctccacacat
cgtcacagcatgctgcagcttgtcgaccggctggtggtgatcgatcaggggcgtgtcatc
gccgacggacccaaggagagggtgatcgaggaattgcagaagaacgccgggggcgggcgt
tcgggaaggaaacaatag
DBGET
integrated database retrieval system
