Nitratireductor rhodophyticola: T8J41_03135
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Entry
T8J41_03135 CDS
T09622
Name
(GenBank) fimbria/pilus outer membrane usher protein
KO
K07347
outer membrane usher protein
Organism
nrh
Nitratireductor rhodophyticola
Pathway
nrh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
T8J41_03135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nrh02000
]
T8J41_03135
02044 Secretion system [BR:
nrh02044
]
T8J41_03135
02035 Bacterial motility proteins [BR:
nrh02035
]
T8J41_03135
Transporters [BR:
nrh02000
]
Other transporters
Pores ion channels [TC:
1
]
T8J41_03135
Secretion system [BR:
nrh02044
]
Chaperone-usher system
Type 1 pilus assembly protein
T8J41_03135
Bacterial motility proteins [BR:
nrh02035
]
Pilus system
Fimbrial proteins
T8J41_03135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_C
DDR_swiveling
Motif
Other DBs
NCBI-ProteinID:
WPZ14835
LinkDB
All DBs
Position
complement(686570..688852)
Genome browser
AA seq
760 aa
AA seq
DB search
MDRELYLEVFINEEPTDLIGAFVHRSDGELASSPEELAELGIKPRTKAQDRTGLISLDRL
PGLTYRLDEAAQRLYVSTGDAGRAPRVIDLSVTADQERLKPRSGTGAVLNYALFAGSNAL
FEGDGALFRGVSGSFDGRLFSRFGTLNQSFIAEYSDGALNGFTRLNTTWAYSDPERLLTF
KAGDFISGGLSWTRPVYLGGLQMRRNFSLRPDLVSLPLPSFSGTAAVPSTLEIYTQNART
YSGDVSSGPFRVDNLPVFTGSGEARVVLRDRFGRETVTTLPFYTSSMLLREGLLDFSVEA
GFPRRNFGLRSSDYDERVYGIASVRYGLTNWLTLEGHVELGEDLVNAGAGVAFPLGTYGA
ASVALAGSRSGGQTGGLVNATLELRHNDWSFYGRIQRAFESYQDVASITADRVSAVSGLP
VFSAGVPRAVDQVAIGVPMPLDLSSLNLSYTHLKDADGDRSQILGLSYSQRIFERGNLYA
SAFTDLEDDDSFGVFAGVSFPLGGDVNVTTGVESRPDGVNGFIELAKSEKLENGSFGWRL
RTSEGETPDRRASASYRASFARFEAAIQQHDHKVRATAQVDGAIVVAGGGVFATNRIDDA
FAVVDVGASDVVVKHQNRPVGRTNRQGRILVPRLNSYERNTVSIDPENLPVDASVPATRE
VVVPAYGSGVVLDFGVSDTPNAALVELIDADGIPLPVGLSGRLRDGDEFVVGYDGQAYLT
GLRARNALTVLRQDGTSCSAEFSYESDPGSQVTIQGVTCR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
gtggaccgggaactctatcttgaggtcttcatcaatgaggaaccgaccgatttgatcggt
gcctttgtgcatcgatccgatggagaattggcttcgtcgccggaagagctggcagagctg
ggcatcaagccacgcaccaaggcgcaggatcgcaccggcctcatcagcctggacaggctg
ccgggcctcacctatcgcctcgatgaagccgcacagcggctttatgtgtcgaccggcgat
gcggggcgggctcccagggtgatcgatctttcggttacggcagatcaggaaagactcaag
ccccgctcaggcactggcgcggtgctgaactacgcgctgtttgctggttcgaacgcgctt
ttcgaaggcgatggcgcgttgtttcggggtgtttcaggcagcttcgatggccgtttgttc
agccggttcggaacactgaaccagtcattcattgctgagtattccgacggtgctctcaac
ggcttcacccgattgaacaccacctgggcgtattccgacccggagcgcttgctcaccttc
aaggcgggggatttcatctccggaggactgtcctggaccaggccggtctatctcggcggt
ctccagatgcggcgcaatttttcgctgcgacccgatctggtcagtctgcccctgccgtca
ttctccgggactgccgccgtgccttcgacgctcgaaatctatacgcagaacgccagaacc
tattctggagacgtgtcgtccgggccattcagggtggacaacctgccggtcttcacgggt
tccggcgaagcgcgcgtcgttcttcgcgatcggtttggccgggaaacggtgacaaccctt
cctttctacacctccagcatgctcctgcgtgaaggcctgctcgacttctcggttgaagcc
gggttcccgcggcgcaatttcggcctcagatccagcgactatgacgaacgcgtctatggc
atcgccagcgttcgctacgggctcaccaactggttgacgcttgaggggcatgtcgaactt
ggagaagacctcgtgaatgcaggcgcgggagtggcattcccacttggaacctacggcgcc
gcctccgttgcgctcgcgggaagccgcagcggcggccagacaggcgggctggtcaacgca
acgctcgaactgcgccacaacgactggagcttttacgggcgcatccagcgcgcgttcgag
tcctaccaggatgtggcatcgatcaccgcagaccgggtctcggccgtgagtggactcccg
gtgttcagcgcgggcgtgccccgggctgtcgatcaggtcgccatcggcgtgcccatgcca
ctggacctgtccagtctcaatctttcctatacgcatctgaaggatgccgacggagacaga
agccagatcctcggcctgtcatacagccagcgcatattcgagaggggcaacctctatgcc
agtgccttcacggatctggaagatgacgacagtttcggtgtcttcgccggtgtgtccttc
cctctcggcggcgatgtgaatgtgaccaccggcgtcgaaagcagacctgatggcgtgaat
ggatttatcgaactcgccaaatccgaaaagctggagaatggcagtttcggctggcggctc
cgcacctctgaaggagaaacgccggaccgcagggcatccgccagctatcgcgcgtccttt
gcacggttcgaggcggcgatccagcagcacgaccacaaggtcagggcgacagcgcaggtt
gatggagccatcgtggtggccggcggaggcgtgttcgccacgaaccgtattgacgatgcg
tttgcggttgttgatgtgggggcgagcgatgtcgtcgtgaagcaccagaacaggccggtg
ggcaggaccaatcgccagggcagaatccttgttccccgcctgaattcctatgagcgcaac
accgtgtcgatcgacccggaaaatctccccgtggacgccagtgtgccggccaccagagaa
gttgtggtgcctgcatatggcagcggtgttgtgctggattttggtgtctcggacaccccg
aacgcagcccttgtggagctgatcgatgcggatggcattcctctcccggtgggcctgtcc
ggcaggctgcgcgatggggacgagttcgtcgtgggatatgacggtcaggcctatctgacc
ggacttcgagcccggaatgccctcacggttctacgacaggacggtacgtcatgttccgca
gaattttcctacgagtccgacccgggcagtcaggtgacaatccagggtgtcacatgcaga
tag
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