Nitratireductor rhodophyticola: T8J41_03945
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Entry
T8J41_03945 CDS
T09622
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nrh
Nitratireductor rhodophyticola
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nrh03016
]
T8J41_03945
Enzymes [BR:
nrh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
T8J41_03945
Transfer RNA biogenesis [BR:
nrh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
T8J41_03945
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WPZ14983
LinkDB
All DBs
Position
859664..860281
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AA seq
205 aa
AA seq
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MTIRFHKNDLPDLSNYDVDAVAIDTETLGLKPHRDRLCVVQLSPGDGTADVVQIDAGQKK
APNLVALLKNRKITKLFHYARFDLAVLYHSFGVMPEPVFCSKIASRLTRTYTDRHGLKDL
CNELLGVSLSKAQQSSDWAAEELSPEQLEYAASDVLYLHQLREKLMERLEREKRTREAEA
CFRFLPTRAKLDLMGWEEADIFAHS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccgatttcacaagaacgacctgcccgatctcagcaactacgatgtcgatgcc
gttgccatcgacacggagacgctgggcctgaagccccaccgcgaccggctgtgcgtggtg
cagctctcgccgggcgacggcacggccgatgtggtgcagatcgatgccgggcagaagaag
gcgccgaacctcgtcgcgcttttgaagaaccgcaagatcaccaagctgttccactatgca
cgcttcgatctggcggtgctttatcacagcttcggcgtgatgccggagccggtgttctgc
tcaaaaatcgcctcgcgcctcacccgcacctacaccgatcggcatgggctaaaggatctt
tgcaacgaactgcttggcgtgtcgctttcgaaggcgcagcagtcttccgactgggcggcc
gaggagctttcgcccgagcagctcgaatatgcggcgtccgacgtgctctacctgcaccag
ttgcgcgaaaaactcatggagcggcttgagcgcgagaagcgcacgcgcgaggccgaagcc
tgcttccgcttcctgccgacacgggcgaaactggacctgatgggctgggaagaggcagat
attttcgcccatagctga
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