Nitratireductor rhodophyticola: T8J41_04050
Help
Entry
T8J41_04050 CDS
T09622
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nrh
Nitratireductor rhodophyticola
Pathway
nrh03030
DNA replication
nrh03430
Mismatch repair
nrh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T8J41_04050
03430 Mismatch repair
T8J41_04050
03440 Homologous recombination
T8J41_04050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nrh03032
]
T8J41_04050
03400 DNA repair and recombination proteins [BR:
nrh03400
]
T8J41_04050
Enzymes [BR:
nrh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T8J41_04050
DNA replication proteins [BR:
nrh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T8J41_04050
DNA repair and recombination proteins [BR:
nrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T8J41_04050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
RuvB_N
AAA_5
AAA_30
AAA_14
AAA_18
AAA_19
TsaE
AAA_24
DUF815
SRP54
AAA_33
CbiA
ABC_tran
SKI
RNA_helicase
VapE-like_dom
nSTAND3
Thymidylate_kin
AAA_28
DEAD
AAA_2
Motif
Other DBs
NCBI-ProteinID:
WPZ16206
LinkDB
All DBs
Position
complement(879465..881303)
Genome browser
AA seq
612 aa
AA seq
DB search
MTEAGTKASDRAGGAYRVLARKYRPSDFTGLIGQEPMVRTLTNAFNAGRIAQAWMLTGVR
GVGKTTTARILARALNYKTDTIDAPTVDLTVEGEHCRAILEGRHVDVVEMDAASHTGIDD
IRDIIDQVRYAPVSARYKVFIIDEVHMLSNQAFNGLLKTLEEPPPHVKFIFATTEIRKVP
ITILSRCQRFDLRRIDAAMIKADLARIGGLEGVEAEDEALAMIARASEGSMRDAQSIFDQ
AIAHSSGKVSAQTVRDMLGLADRSRIIGLFEDLMKGDVAAALAEFRAQYDVGADPATVLN
DLAEFNHLVTRLRFVPEAAEDAALSEDERTRGLEFSKTLSVRVLSRTWQMLLKGIQEVQS
SGRPMAAGEMVLIRIAHAASLPTLDEALKRLDDMPAGAGNGQGQPPAPGGISPSGNGGGG
AMASAVATQHAPVSGGGQTMRLVQPEAAPVAMQPPVVAEEAVPDTVPLKSLEDIARLADA
KRDMAFKVLLKRCVRLVSIEPGRLDISLTEDAPKTVMGDLTNRLKEWTGRRWIVSLSSEA
GGPTLAEQEEGRRESAIADAKADPAVAAILDRFPGAKIIDIRIPDATDPDAVEETADAID
PVDPDDDDDDDF
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggccggcaccaaagcaagcgacagggccggcggcgcctaccgggttcttgcc
cgcaaataccgccccagtgatttcaccggactgatcggccaggagccgatggtgcgcacg
ctcaccaacgcgttcaacgccgggcgcatcgcgcaggcctggatgctgaccggcgtgcgc
ggtgtgggcaagacgactacggcgcgcattctcgcacgcgcactcaactacaagacagac
accatcgatgcgccaacggtcgatctcaccgttgagggcgaacattgccgcgccatcctc
gaaggccgtcacgtggacgtggtcgaaatggatgccgcctcgcacaccggcatcgacgac
atacgcgacatcatcgatcaggtgcgctacgcgccggtctccgcgcgctacaaggttttc
atcatcgatgaggtccatatgctctccaaccaggccttcaacggcctgttgaagacgctt
gaggagccgccgccgcatgtgaagttcatcttcgccaccacggaaatccgcaaggttccc
atcaccattctctcgcgctgccagcgcttcgatctgcgtcgcatcgatgcggcgatgata
aaggccgatctcgcccgcatcggcgggctcgagggcgtggaggcagaagacgaggcgctg
gccatgatcgcgcgcgcgtccgaaggctcgatgcgcgacgcccagtcgatcttcgatcag
gcgattgcccattcctccggcaaggtctcggcgcaaaccgtgcgcgacatgctgggtctg
gcggaccgcagccgcatcatcggcctgttcgaagacctgatgaagggcgatgtggctgcc
gcgctggccgagttccgcgcgcaatacgacgttggcgccgacccggcaacggtgctcaac
gaccttgccgagttcaatcatctggtcacccgtctgcggttcgtgccggaagctgccgaa
gacgcagcactttccgaggacgagcgcacgcgcggtctcgaattctccaaaacactgtcc
gtgcgcgtcctctcgcgcacatggcagatgctcctcaagggcattcaggaggtacagtcc
tccggccggcccatggctgctggcgagatggtgctgatccgcatcgcccatgccgccagc
cttccgacactcgatgaggcgctgaagcggctggacgacatgccggcaggcgcgggcaac
gggcagggccagcctccggcgcccggcgggatttcaccgtccggcaatggcggcggtggc
gcaatggcatccgccgttgcgacccagcatgcgccggtctccggtggcggtcagaccatg
cgtctcgttcagcccgaagcagcgcccgtggcgatgcagccgccggtggttgccgaagag
gcggtgcccgatacggttccgctcaaatcgcttgaggacatcgccagactcgccgatgcg
aagcgcgacatggccttcaaggttcttctcaagcggtgtgtccgccttgtctcgattgag
ccgggtcgcctcgacatcagcctcaccgaggatgcgccgaagacggtgatgggtgatctc
accaatcggctgaaggaatggaccggccgtcgctggatcgtctcgctgtcgagcgaggct
ggcgggccgacgctcgccgagcaggaggagggccgccgcgagagtgcgatcgccgacgcg
aaggccgacccggcggtcgcggccattctcgaccgtttccccggcgcgaagatcatcgac
atccgcatcccggatgcaaccgaccctgatgcggtcgaagagacagccgacgcaattgat
ccggtcgatccggacgatgatgacgacgacgatttctaa
DBGET
integrated database retrieval system
