Nitratireductor rhodophyticola: T8J41_05060
Help
Entry
T8J41_05060 CDS
T09622
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
nrh
Nitratireductor rhodophyticola
Pathway
nrh00630
Glyoxylate and dicarboxylate metabolism
nrh00680
Methane metabolism
nrh01100
Metabolic pathways
nrh01120
Microbial metabolism in diverse environments
nrh01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
T8J41_05060 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
T8J41_05060 (fdhF)
Enzymes [BR:
nrh01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
T8J41_05060 (fdhF)
BRITE hierarchy
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_9
Fer4_8
Fer4_10
Fer4_16
Fer4_6
Fer4_21
Fer4_2
Fer4_18
Fer4_4
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
WPZ15186
LinkDB
All DBs
Position
1105973..1108846
Genome browser
AA seq
957 aa
AA seq
DB search
MCFVNEIDYGTPAAKSDKTVTLTIDGKSVTVPEGTSIMRAAREAGIAVPKLCANDMVKSF
GSCRLCLVEIEGKGGTPASCTTPAMDGIAVNTQTDRLNTIRRGVMELYMSDHPEDCAACA
MGDCEMANMAESVGLKQNRYGDEGANHLEPSPIGEHGVNFKELDVSNPYFAYDPAKCIVC
SLCVRACEEQQGTFALTVEGRGFESRITAGMDEPFLQSECVSCGACVQACPTGALQEKSI
IEMGMPDHSAVTTCAYCGVGCSFKAEMKGEEVVRMVPYKDGKANRGHSCVKGRFAYGYAT
HKDRILNPMIREKITDPWREVSWEEVYAHIGSEIGRIQKKYGRGSVGGITSSRCTNEETY
LVQKLVRQVFGNNNVDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVEHSDVVLVIGANPT
DGHPVFASRLKKRLREGAKLIVLDPRRIDLVRTPHVEASYHLPLKPGTNVAVLTALAHVI
VSEGLFDEAFIRERCDWDEFQDWASFVLQPENSPEAVEKMSGVSAELIRGAARLYATGGN
GAIYYGLGVTEHSQGSTTVMAIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPHE
MPGYRHISEDATRAIYESLWGVKLDNEPGLRIPNMLDAAVDGSFKALYVQGEDILQSDPN
THHVAAGLEAMECVIVHDLFLNETANYAHIFLPGSTFLEKDGTFTNAERRINRVRKVMEP
KNGYADWEVTQDMARALGQDWNYTHPSEIMAEIAATTPSFAGVTYELLEKEGSVQWPCNE
KAPTGTPVMHTDGFVRGKGKFVRTAYVATDEKAGPRFPLLLTTGRILSQYNVGAQTRRTE
NVVWHDEDLLEIHPFDAETRGIREGDWVKLKSRSGETSLRATITERVAPGVVYTTFHHPA
TQANVVTTEYSDWATNCPEYKVTAVQVSPSNGPTEWQEDYEEHARQSRRIVHVEAAE
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcgtgaacgaaatcgactacggcacacccgcagcgaaatccgacaagacggtg
acgctgaccattgatggaaaatccgtgaccgttccggaaggcacctcgatcatgcgcgcc
gcgcgcgaggccggcatcgccgtgccgaagctctgcgccaacgacatggtcaagagcttc
ggctcctgccgtctctgccttgtcgagatcgagggcaagggcggcacgccggcatcgtgc
accaccccggccatggacggcattgccgtcaacacccagaccgaccgcctcaacaccatc
cgccgcggcgtgatggaactctacatgtccgaccatccggaagactgcgcggcctgcgcc
atgggcgactgcgagatggcgaacatggccgagagcgtcggtctgaagcagaaccgctat
ggcgatgaaggggcaaaccacctcgaaccctcacccatcggtgagcacggggtgaacttc
aaggaactggacgtttccaacccctatttcgcttacgacccggcgaagtgcatcgtctgc
tcgctgtgcgttcgcgcctgtgaagagcagcagggcaccttcgccctgacagtggaaggc
cgtggtttcgaaagccgcatcaccgccggcatggacgagcccttcctgcagtcggaatgc
gtttcctgcggcgcctgcgtgcaggcctgtcccaccggcgcgcttcaggaaaaatccatc
atcgagatgggcatgcccgaccattccgccgtcaccacctgcgcctattgcggcgtcggc
tgttcgttcaaggccgagatgaagggcgaggaagtcgtccgcatggtgccctacaaggat
ggcaaggccaatcgcggccattcctgcgtgaagggccgcttcgcctatggctacgccacc
cacaaggaccgcatcctcaatccgatgatccgcgagaagatcaccgacccgtggcgcgaa
gtctcgtgggaagaggtctacgcccatatcggcagcgagatcggccgcatccagaagaaa
tatggccggggctcggtgggcggcatcacctcttcgcgttgcaccaatgaagagacctat
ctcgtccagaagctggtgcgtcaggtcttcggcaacaacaatgtcgacacctgcgcacgc
gtctgccactcgcccaccggctacggcctcaagaccaccttcggcacctccgccggcacg
caggatttcgattcggtcgaacattccgatgtggttctggtgatcggcgcaaacccgacc
gacgggcatcccgtgttcgcctctcggctgaaaaagcgcctgcgcgaaggcgcgaagctg
atcgtcctcgacccgcgccgcatcgacctcgtgcgcacgccccatgtggaggcgagctat
cacctgcccttgaagcctggcaccaatgtcgccgtcttgacggcccttgcccatgtgatc
gtttccgaaggcctgtttgacgaagcgttcatccgcgagcgctgcgactgggacgaattc
caggactgggcgagcttcgttctccagccggaaaacagccccgaagccgtcgaaaagatg
tccggcgtttccgccgagctgatccgcggtgctgcacgcctctacgcaacgggcggtaac
ggcgcgatctattacggtctcggcgtcaccgagcacagccagggctccaccaccgtcatg
gccatcgcaaaccttgccatggctaccggcaatatcggccggccgggcgtgggcgtgaac
ccgctgcgtgggcagaacaacgtgcagggctcctgcgacatgggctccttcccgcacgag
atgccgggctaccgccacatctccgaggatgcgacccgtgcgatctatgagagcctgtgg
ggcgtgaagctcgacaatgagccgggcctgcgcattcccaacatgctcgacgccgccgtc
gatggctccttcaaggcgctttacgtgcagggcgaggacattctccagtccgatcccaac
acgcaccatgtggcggctgggctagaggcgatggaatgcgtcatcgttcacgatctcttc
ctgaacgagaccgccaactacgcccatatattcctgccgggctcgaccttccttgagaag
gacggcaccttcaccaatgccgaacgccgcatcaaccgcgtccgcaaggtgatggagccc
aagaacggctatgccgactgggaggtcacgcaggacatggcccgtgcgctgggtcaggac
tggaactacacgcatccttccgagatcatggccgagatcgcggccaccacgccaagcttc
gccggcgtgacctatgagcttctggaaaaggaaggctcggtccagtggccgtgcaacgag
aaggcccccaccggcacgcccgtcatgcatacggacggcttcgtgcgcggcaagggcaag
ttcgtgcgcaccgcctatgtcgccaccgacgagaaagccggcccgcgcttcccgctactg
ctcaccacgggccgcatcctctcgcagtacaatgtcggcgcacagacccgccgcacggag
aatgtcgtctggcacgacgaggatctgcttgagatccatcccttcgacgccgagacccgt
ggcatccgcgagggcgactgggtgaagctcaagagccgctccggcgagaccagcctgcgc
gccaccatcaccgaacgcgttgcgccgggcgtcgtctacaccaccttccaccacccggcc
acgcaggccaatgtggtgacgaccgagtattccgactgggccaccaactgccccgaatac
aaggtcacggcggtgcaggtctcaccctccaacggcccgaccgagtggcaggaagactac
gaggagcacgcccgccaaagccgccgcatcgtgcatgtggaggcagcggagtag
DBGET
integrated database retrieval system
