Nitratireductor rhodophyticola: T8J41_05115
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Entry
T8J41_05115 CDS
T09622
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nrh
Nitratireductor rhodophyticola
Pathway
nrh00061
Fatty acid biosynthesis
nrh00071
Fatty acid degradation
nrh01100
Metabolic pathways
nrh01212
Fatty acid metabolism
nrh02024
Quorum sensing
nrh04146
Peroxisome
Module
nrh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
T8J41_05115
00071 Fatty acid degradation
T8J41_05115
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
T8J41_05115
09145 Cellular community - prokaryotes
02024 Quorum sensing
T8J41_05115
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nrh01004
]
T8J41_05115
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nrh04147
]
T8J41_05115
Enzymes [BR:
nrh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
T8J41_05115
Lipid biosynthesis proteins [BR:
nrh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
T8J41_05115
Exosome [BR:
nrh04147
]
Exosomal proteins
Exosomal proteins of breast milk
T8J41_05115
Exosomal proteins of breast cancer cells
T8J41_05115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WPZ15197
LinkDB
All DBs
Position
complement(1118126..1120000)
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AA seq
624 aa
AA seq
DB search
MAKSAKTPAKGEEKTARTAKGGTGGKTVAKKAASTTAKKPAAKSAAGSSKKSATSAGKAA
PKKAQASRKAGIARPWVEHYPEGIPAEMGDFPNNSLGELLVDACKTYGDRPAFTCMGKSL
SYRDLEEMSRHFAGYLQSLGLERGARVALMMPNVLQYPVAMMAVLRAGYVVVNVNPLYTP
RELEHQLNDAGAEAIVILENFAHTLEAVASKTSVKHVVVASMGELLGLKGHIVNFVVRRV
KKMVPAWSLPGHVSFREAVKKGASHGFRPVEIALSDNAFLQYTGGTTGLSKGATLLHSNV
LANVIQNELWFRSAYIGKPKPGAPVLICALPLYHIYALTVNALMGMKLGGNNVLIPNPRD
IPAFVKELQKYDFHIFPGLNTLFNALLNNEDFCKLPFKSLLVTFGGGMAVQRAVAERWQK
LTGCVISQGYGLSETSPVATVNSFAAKEFTGTIGYPISSTDVVIRDDKGKNLPFGKVGEI
CIRGPQVMAGYWNRPDETAKVMTEDGFFRSGDMGTMDETGQVTIVDRKKDMIVVSGFKVF
PNEVEDVIANHPGVLEAAIVGVEDEHSGEVPKLFVVRKDANLTEEDLKAFCKENLTGYKR
PKYIEFRDDLPKSNVGKILRKELR
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaagcgcaaagacgcccgccaagggtgaagagaaaaccgcgcgcaccgcaaag
ggcggaacgggcggcaagacggtggccaaaaaggcggcatcgaccacggcgaagaagccg
gccgcgaaatccgcagccggttcatcgaagaagtcggcgacttctgccggcaaggctgcg
ccgaaaaaagcccaggcgtcccgcaaggccgggatcgcccggccgtgggtggagcattat
cccgagggcattcccgcagagatgggagacttccccaacaattcgcttggcgaattgctc
gtggacgcctgcaagacctatggcgaccgccccgctttcacctgcatgggcaaatcgctc
agctaccgcgaccttgaggagatgtcgcggcacttcgcgggctatctgcagtcgcttggg
cttgagcgcggcgcgcgcgttgccctgatgatgcccaatgtcctgcaatatcccgtcgcc
atgatggcggttctgcgggccggctacgtggtggtcaatgtcaatccgctctacacgccg
cgagagctggaacatcagctcaacgatgcgggtgcggaagccatcgtcatactggaaaac
ttcgcccacacgctcgaggccgtcgcctcgaagacttcggtgaagcacgtggtcgttgcc
tcgatgggcgagcttctggggctcaagggccacatcgtcaatttcgtggtgcgccgggtc
aagaaaatggtgcccgcctggtctctgccggggcatgtgtccttcagggaggcggtcaag
aagggtgcgtcccatgggttcaggccggtggagatcgcgctgtcggacaatgccttcctg
caatatacgggtggcacgaccggcctttccaagggcgcaacgctgttgcacagcaatgtg
ctggccaatgtgatccagaacgaactctggttccgcagcgcctatatcggcaaaccgaag
cccggtgcgccggtgttgatctgcgccctgccgctctatcatatctacgcgctcacggtg
aacgcgctgatgggcatgaagctcggtggcaacaatgtgctgatccccaatccgcgcgac
attcctgccttcgtgaaggagctgcagaaatacgacttccacattttcccggggctcaac
acgctgtttaatgcgctcctgaacaatgaggatttctgcaagcttcccttcaagagcctg
ctcgtcaccttcggcggcggcatggcggtgcagcgcgcggtcgccgagcgctggcagaag
ctcactggctgcgtgatctcgcagggctatggtctctcggaaacctcgcccgtggccacg
gtgaacagctttgcggcgaaggagttcaccggcacgatcggctatccgatttcgtccacc
gacgtcgtcatccgtgacgacaagggcaagaacctgccctttggcaaggtcggcgagatc
tgcattcgtggcccgcaggtgatggcaggctactggaaccggccggacgaaaccgccaag
gtcatgaccgaggacggctttttccgctccggcgacatgggcacgatggatgagaccggc
caggtcaccatcgtcgaccgcaagaaggacatgatcgttgtctccggcttcaaggtcttc
cccaacgaggtggaagacgtgatcgccaatcacccgggtgttctggaagcggcaattgtc
ggcgtcgaggacgagcattcaggcgaggtgccgaagctcttcgtggtccgcaaggacgcg
aacctgacggaagaggacctcaaggcgttctgcaaggagaacctcaccggctacaagcgc
ccgaaatatatcgagttccgcgacgatctgccgaaatccaatgtcggcaagatcctgcgc
aaggaactacgctga
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