Nitratireductor rhodophyticola: T8J41_05945
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Entry
T8J41_05945 CDS
T09622
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
nrh
Nitratireductor rhodophyticola
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nrh03400
]
T8J41_05945 (addB)
Enzymes [BR:
nrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T8J41_05945 (addB)
DNA repair and recombination proteins [BR:
nrh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
T8J41_05945 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WPZ15354
LinkDB
All DBs
Position
complement(1283110..1286235)
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AA seq
1041 aa
AA seq
DB search
MLAEDRSRVFSIPPGVGFLETLVEALFEGRLVPGFRHTGDPLALADVTIYLPTRRAARAL
RDVLLRKLDGQSAILPVIRPLGEFDEEAALFDTEGATALDLAPPIEALDRILLLAPLVQA
WKARLPGHVAALFEEGVVVPASASDSIWLARDLAGLMDEIETEEADWTKLASLAPDALAH
WWQVTLEFLQIVTAHWPKLLEELDRSNPAAHRNAMLAAEAARLKAHAHKGPVIAAGSTGS
IPATARLLATIAGLENGAVVLPGLDTRLDARGWEAVGDVDEPSAFGHPQAGLKKLLSAMG
ITRDEVVELGEPAPPLALRRALVSETLRPAETTDAWLENQALAADATEGDALSGVTLVET
ANEREEALSIAVALRMALTDENATAALVTPDRGLARRVAVELRRFGIEADDSGGTPLADT
PPATLARLLLETVFRPGEPIAMVALLKHPLLRLGLKRASVRRAAETIELVALRGGTGRPD
IATLDALFETRWGAIERDTRKPFWFPRVNDAALAEARAVLGALVEALRPLAALRGQSGIG
VPEMARKTVEVLEALGRSEDGSLTNYYDGERGQAMAAFLRGLVGSQTTLPFDAAEWPAVF
AALIATEVVKPTMGADRRVAIWGTLEARLLHVDTMVLGGMNEGTWPAIPSSDRFMSRLMK
AELSLEPPERRIGQAAHDFMMAMGTKNVVLTRAARAGDAPAVASRWLQRLTAFAGKDVAE
TMRARGRELIAWARLLDDRPDEDFAPRPEPAPPVEARPTRFSITEIETLRRDPYAVYAKR
ILALVALDPLIRDPGAAERGNLFHDVLERFIKEVEDPTAPNALDRLIAIGRELFSEAGLP
QDVATVWWPRFERTAASVIEWERARAEGIAKRHAEIRASAIEVAKLGLTLSGRADRIDIR
ADGSAEILDYKTGASPSRRQAHTLLSPQLALEAALLQRGAFADIGPAEPGDLAYVRLKAN
GEVVPESILRMKDSDKTAPGMAEEAWERLGQLLAHYHKPETGYRSRVLPFREGDVDGDYD
HLARVLEWSAGGDAGEGGGDE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgaagatagaagccgcgtcttttccatcccccccggcgtcggctttctggag
acgcttgtcgaagccctgtttgagggcaggctcgtgccgggctttcgccacacgggcgat
ccgctggccctggccgatgtcaccatctatctgccaacccgccgtgccgcgcgcgccctg
cgcgatgtcctgcttcgaaagctcgatggtcaatccgccatcctccccgtcattcgcccg
ctgggcgagttcgatgaggaggccgcgctgttcgatacagagggtgccaccgcgctcgat
cttgccccgccgatagaggcgctggaccgcatcctgctgctggcaccgctggtgcaggcg
tggaaggcgcggctgcccggccacgtggcggcattgtttgaggaaggtgtcgtggtgccg
gcttcggcgtcggattccatctggctcgcgcgcgatctcgccggtttgatggacgagatc
gaaaccgaggaagccgactggacaaagctcgccagcctcgcacccgatgcgctggcgcac
tggtggcaggtgacgctcgaattcctgcagatcgtcaccgcccattggccaaagctgctg
gaggaactcgaccgttccaaccccgccgcgcatcgaaacgcgatgctggcggcagaggcc
gcacgcctcaaggcccatgcacacaaaggcccggtcatcgctgccggctccaccggctcc
attccggcgacagcgcggcttctggcgacgatcgccgggctggaaaacggcgccgtggtc
ttgccgggtctcgacacccggctcgacgcacgtggctgggaggcggtgggcgatgttgac
gaaccatccgccttcggccatccgcaggcagggttgaagaaactgctttccgccatgggc
atcacgcgcgacgaggtggtcgagcttggcgagcctgccccgccgcttgccctgcgccgc
gccttggtcagcgaaacgctgcgtcctgccgaaaccacggatgcctggcttgaaaatcag
gcgctggcagccgatgcaacggaaggggatgcgctttccggcgtgactttggtggagacc
gcaaacgagcgtgaggaagcgctgtcgatagccgttgcgctgcgcatggccttgaccgac
gagaacgcaacggcggcactcgtcacacccgatcgcggtcttgcgcggcgtgtcgcggtg
gagctgcgtcgcttcggcatcgaggccgatgattccggcggcacgccgctcgccgacacc
ccgccggcaacgctcgcccggctgctgctcgaaaccgtgttccgccccggcgagcccatc
gccatggtggccctgctcaagcatcctttgctccggctggggctgaagcgcgccagcgtg
cgccgcgccgccgagaccatcgagcttgtggcgctgcgcggcggcacgggtcggccggat
atcgccacactcgatgcgctttttgaaacacgctggggagcgatcgaacgcgacacgcgc
aaacccttctggttcccgcgtgtcaacgacgccgcactggccgaagcacgcgccgtgctc
ggtgctctggtcgaagcactgcgcccactggccgccctgcgcgggcaatcgggcatcggc
gtgcccgagatggcgcgcaagacagtcgaggttctcgaagcactgggtcgctcagaggat
ggcagcctgacaaattactatgacggcgagcgcggacaggccatggccgccttcctgcgc
ggtctggtgggttcgcaaactaccctgcccttcgatgccgccgagtggccggcggtcttt
gccgcgctcatcgccaccgaggtggtgaagcccaccatgggcgcagacaggcgcgtggcc
atctggggcacgctcgaagcgcggcttctgcatgtcgacacgatggttctgggcggcatg
aatgaaggcacctggcctgccattccctcctccgaccgcttcatgtcgcgcctgatgaag
gccgagctttcgctggagccgccggagcgccgcatcggccaggccgcgcatgatttcatg
atggcgatgggcacgaagaatgtggtgctgacacgcgccgcccgcgccggcgatgcgccg
gctgtcgcttcgcgctggctgcagcgcctcacggcttttgccggcaaagatgtcgccgaa
accatgcgcgcgcgcggccgggagctgatcgcatgggcacgccttctggacgacaggccg
gacgaggatttcgccccccggcccgagccagcgccgccggtcgaggcgcgccccacgcgc
ttctccatcaccgagatcgagacgctgcggcgtgacccctatgccgtctatgcaaaacgc
atattggcgcttgtcgcgcttgacccgctgatccgcgatccgggtgccgccgaacgcggc
aatctcttccacgatgttctggagcgcttcatcaaggaggtggaggatccgacggccccc
aacgcgctcgacaggctgatcgccattggccgcgagctcttttccgaagccggtctcccg
caggatgtggcaacggtctggtggccacgcttcgagcgcacggcggcctcggtcatcgag
tgggagcgcgctcgcgccgagggcatcgcaaagcgccatgcagaaatccgcgcctccgcc
atcgaggtggcgaagctcgggctcaccctttcaggtcgggccgaccgcatcgacatccgc
gccgatggcagcgccgaaatcctcgactacaagaccggcgcctcgccgtcgcgccggcag
gcgcacacgcttctctcgccacagcttgcgctggaggcggcgctgcttcagcgcggcgcg
ttcgccgatatcggtcccgccgagccgggcgaccttgcctatgtgcggctcaaggccaat
ggcgaggtggtgcctgaatccatcctgcgcatgaaggacagcgacaagacagcacccggc
atggccgaagaggcatgggaacggctggggcagcttctcgcccattatcacaagcccgag
acgggctatcgctcgcgtgtcctgcccttccgcgagggcgatgtggatggcgattacgac
catctggcgcgcgtgctcgaatggtctgccggcggcgatgcgggcgaaggcggaggggac
gaatga
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