Nitratireductor rhodophyticola: T8J41_06320
Help
Entry
T8J41_06320 CDS
T09622
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nrh
Nitratireductor rhodophyticola
Pathway
nrh03030
DNA replication
nrh03410
Base excision repair
nrh03420
Nucleotide excision repair
nrh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T8J41_06320 (polA)
03410 Base excision repair
T8J41_06320 (polA)
03420 Nucleotide excision repair
T8J41_06320 (polA)
03440 Homologous recombination
T8J41_06320 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nrh03032
]
T8J41_06320 (polA)
03400 DNA repair and recombination proteins [BR:
nrh03400
]
T8J41_06320 (polA)
Enzymes [BR:
nrh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T8J41_06320 (polA)
DNA replication proteins [BR:
nrh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
T8J41_06320 (polA)
DNA repair and recombination proteins [BR:
nrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
T8J41_06320 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T8J41_06320 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_polI_exo1
HHH
HHH_2
DprA_N
IMS_HHH
Flg_hook
Motif
Other DBs
NCBI-ProteinID:
WPZ15424
LinkDB
All DBs
Position
complement(1358078..1360990)
Genome browser
AA seq
970 aa
AA seq
DB search
MKKGDHLFLVDGSGYIFRAYHALPPLTRKSDGLPVGAVAGFCNMLWKLLQNARDTDVGVT
PTHFAVIFDHSSKTFRNDLYPEYKANRSEPPEDLVPQFGLIREATLAFDLPCIEMAGFEA
DDLIATYARLASEAGGETTIISSDKDLMQLVTDRVSMYDPMKDREIRVPEVIEKWGVPPE
KMIDLQALTGDSVDNVPGVPGIGPKTAAQLLEEYGDLDTLLSRANEIKQNKRRENLIEFA
EKARISRELVKLRIDVPVEHGIDTFELAPPDGPKLIGFLKAMEFSTLTRRVAEATGAEVA
EIEAAHVEVEAGESAHGPDLDPSPAESDGDAATPAKLAAGIAEAGAAQTFDHAGYECVRD
LDTLKRWIEEACETGILAFDTETTSLDPMQAELCGFSLATKPGRAAYVPLNHKSGDGDLL
GGGLIENQIPQKDALEAIRAVMANPAVLKIGQNLKYDWLLMYRLGVEIVGVDDTMLMSYV
LDAGTGSHGTVSHGMDALSERWLGHKPIPYKELTGTGRKQVTFDMVDLERATAYAAEDAD
ITLRLWQVLKPRLAAEGLVSVYERLERPMIPVIGRMEHRGVAVDRQILSRLSGDFAQTAA
GIEDEIYELAGERFTIGSPKQLGEILFGKMGLPGGSKTKTGQWSTSAQVLEDLAAAGHEL
PRKIVDWRQVTKLKSTYTDALPGYINPETKRVHTSYALASTTTGRLSSSEPNLQNIPIRT
TEGRKIRTAFVAPEGARLISADYSQIELRVLAHVADIPELKKAFADGLDIHAMTASEMFD
VPVEGMPPEVRRRAKAINFGIIYGISAFGLANQLGIPREEASAYIKRYFERFPGIKDYMD
STKTQAREQGYVETVFGRRAHYPEIRSSNPQLRAFNERAAINAPIQGSAADIIRRAMARM
ENALADAGLEDVQMLLQVHDELIFEAPESKVEKAIPVICEVMENAALPARALSVPLQVEA
RAASNWDEAH
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatcttttcctcgttgacggctcgggctacatctttcgtgcctat
cacgcactgcccccgctgacccgcaaatccgacggcctgccggtcggtgcggtggccggc
ttctgcaacatgctctggaaactgctgcagaatgcgcgcgacacggatgtcggcgtcaca
ccgacgcattttgcggtgattttcgaccattcctcgaaaaccttccgcaacgacctctac
ccggaatacaaagccaaccgctccgaaccgccggaagacctcgtgccgcagttcggcctg
atccgcgaagcgacactggctttcgacctgccctgtatcgaaatggccggtttcgaggcc
gatgacctgattgccacctatgccaggcttgcgagtgaagcaggcggcgaaaccaccatc
atttcctctgacaaggacctgatgcagctcgtcaccgatcgcgtctccatgtacgacccg
atgaaggatcgcgagatccgggttccggaagtgatcgagaaatggggcgttccgcccgag
aaaatgatcgaccttcaggcgctgacgggcgattcggtggacaacgtccccggcgtcccc
ggaatcggtccgaaaacggccgcgcaactgctcgaagagtatggcgatctcgacacgctg
ctttctcgcgcaaatgagataaaacagaacaaaagacgcgaaaacctgatcgaattcgcc
gaaaaggcacgcatttcccgcgaattggtgaagctcaggatcgacgtcccggtcgagcac
gggatcgacacgttcgagctcgctccgcccgacgggccgaagctgatcggcttcctgaaa
gcgatggagttctccaccctgacgcgccgcgtggcggaagccaccggcgctgaagtggcg
gaaatcgaagccgctcatgtggaggtggaggcaggcgaaagcgcccacgggccggacctc
gacccctcccccgccgaaagcgacggagacgcagcaacccctgcgaagcttgcagccggt
atcgcagaagctggcgcagcgcagactttcgaccatgccggctacgaatgcgtccgcgat
ctggacacgctgaagcgctggattgaggaagcctgcgagaccggcatcctcgccttcgac
accgagaccacctcgctcgatccgatgcaggcggaactctgcggcttttcgctcgccacg
aaacccggtcgtgccgcctatgtcccgctcaaccacaagagcggcgacggcgaccttctg
ggcggcgggctgatcgagaaccagataccgcagaaggacgcgctggaggcgatccgcgcc
gtcatggccaatcctgccgtgctcaagatcggccagaacctaaaatatgactggctgctg
atgtatcgactcggcgtggagatcgtcggcgtcgacgacaccatgctcatgtcctatgtg
ctcgatgccggaaccggcagccacggcacggtgagccacggcatggacgcgctatccgaa
cgctggctgggtcacaaacccatcccctacaaggaactgacgggaacgggccgcaagcag
gtcaccttcgacatggtcgatctggagcgcgccaccgcctacgccgccgaagatgccgac
atcacgctccggctctggcaggtgctgaagccgcggcttgccgccgaaggcctcgtttcc
gtctatgagcggctcgaacggcccatgatcccggtgatcggccgcatggagcatcgcggc
gtcgccgtcgaccggcagattctttcgcggctttcaggcgatttcgcacagacggcagcg
ggcatcgaagacgagatctacgagctggccggtgaacgcttcaccatcggctcgcccaag
cagcttggcgagatcctgttcggcaagatgggccttccgggcggcagcaagacgaagacc
ggccagtggtcgacttcggcgcaggtgctcgaagaccttgcagccgcgggccatgagctt
ccgcgcaagatcgtcgactggcgccaggtcaccaagctcaaatccacctatacggatgcc
ctgccgggctacatcaaccctgaaaccaagcgggtgcacacctcctacgcacttgcttcc
accacgaccggacgcctctcatcgtccgaaccgaacctgcagaacatcccgatccgcacc
acagagggccgtaaaatccgcaccgccttcgtggcacctgagggcgccaggctgatttcg
gccgactacagccagatcgaactgcgcgtgctcgcccatgtggcggatatccccgagctc
aagaaagcctttgccgacgggctcgatattcacgcaatgacggcgtcggaaatgttcgat
gtaccggtggaaggcatgccgccggaggtgcgccgccgcgccaaggcaatcaatttcggc
atcatctacggtatctcggcgttcgggttggccaatcagctcggcattccgcgtgaagag
gccagcgcctatatcaagcgctatttcgagcgtttccccggcatcaaggactatatggat
tccaccaagacccaggcacgcgagcagggctatgtggagaccgtgttcggccgccgggca
cactatcccgaaatccgctcctcaaacccgcaactgcgcgccttcaacgaacgcgcggcg
atcaacgcgccgatccagggctcggcagccgacatcatccgccgcgcgatggcgcgcatg
gaaaacgctcttgccgatgccggtcttgaagacgtgcagatgctgcttcaggtgcatgac
gaactgatctttgaagcgccggaaagcaaggtggagaaggccattcccgttatctgcgag
gtcatggagaacgcggcacttcccgcacgcgccctctccgttcccctacaggtcgaggcg
cgcgcggcaagcaactgggacgaagcccactga
DBGET
integrated database retrieval system
