Nitratireductor rhodophyticola: T8J41_06500
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Entry
T8J41_06500 CDS
T09622
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
nrh
Nitratireductor rhodophyticola
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nrh03016
]
T8J41_06500 (thpR)
Enzymes [BR:
nrh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
T8J41_06500 (thpR)
Transfer RNA biogenesis [BR:
nrh03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
T8J41_06500 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WPZ15457
LinkDB
All DBs
Position
complement(1393823..1394422)
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AA seq
199 aa
AA seq
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MPRLFTALEIPRDAALSLSLLRGGLPGARWIDVENYHLTLRFFGDVEGHTADEIANALDR
VRRPTFTMKLSGVGAFGQKKPHSIWAGVSASPDLYALQGEIEGICRRLRLPPDPRKFTPH
VTLARLKNANPRDVANYLSARGNFASVPFSVGRFVLMSSRASFGGGPYIIEEAWPLVGAD
HDRQASFDNSASEASRIVW
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgacttttcaccgccctcgagatcccgcgtgacgccgctttgtcgttgtcactt
ctgcgcgggggcctcccaggagctcgttggatcgacgtcgaaaactatcatctgacattg
cggttctttggcgatgtggaaggccacacggccgacgagatcgccaatgccctcgatagg
gttcggcgtccaaccttcacgatgaagctttccggcgtcggggccttcgggcagaagaag
ccgcactccatctgggccggcgtgtccgcttcgcctgatctctacgccctgcagggtgag
attgaaggcatctgccggcgcttacgactgccgccggatcccaggaagttcacaccgcat
gtaacactggcgcgcctgaagaacgccaatccacgcgacgtggcaaactatctttccgcc
cgcggcaactttgcctcggtgcccttcagcgtgggccgtttcgtgctgatgtcgtcgcgt
gcctcgttcggcggcgggccgtatatcatagaggaagcctggcctctcgtgggtgcggac
cacgaccgtcaggcgagtttcgacaacagtgcttcggaagcctcgcggatcgtctggtag
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