Nitratireductor rhodophyticola: T8J41_08350
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Entry
T8J41_08350 CDS
T09622
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
nrh
Nitratireductor rhodophyticola
Pathway
nrh00020
Citrate cycle (TCA cycle)
nrh00640
Propanoate metabolism
nrh00660
C5-Branched dibasic acid metabolism
nrh00720
Other carbon fixation pathways
nrh01100
Metabolic pathways
nrh01110
Biosynthesis of secondary metabolites
nrh01120
Microbial metabolism in diverse environments
nrh01200
Carbon metabolism
Module
nrh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nrh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
T8J41_08350 (sucD)
00640 Propanoate metabolism
T8J41_08350 (sucD)
00660 C5-Branched dibasic acid metabolism
T8J41_08350 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
T8J41_08350 (sucD)
Enzymes [BR:
nrh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
T8J41_08350 (sucD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
WPZ15794
LinkDB
All DBs
Position
complement(1782498..1783400)
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AA seq
300 aa
AA seq
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MSILVNKDTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGIHPKKGGSTWTGQGGEELPIF
ASVAEGKEKTGANASVIYVPPAGAGAAIIEAIEAEIPLIVCITEGIPVMDMVHVKAKLEK
SNSRLIGPNCPGVLTPNECKIGIMPGNIFQKGSVGILSRSGTLTYEAVFQTTNEGLGQST
AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEEAAEFLRDEAKKGRKKPM
AGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEAAGIKVSPSPARLGQTLVEAIKG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctcgtcaacaaagacaccaaggtcctggtgcagggcctgaccggcaagacc
ggaaccttccacaccgagcaggcgctcgcctatcacggcacacagatggtcggcggcatt
caccccaagaagggcggctccacctggaccggccagggcggtgaagagctcccgatcttc
gcatccgttgccgaaggcaaggaaaagaccggcgcaaacgcgtccgtgatctatgtcccg
ccagcaggcgcaggcgcggccatcatcgaggccatcgaggcggaaatcccgctcatcgtc
tgcatcacggaaggcattccggtgatggacatggtccacgtgaaggcgaagctcgagaag
tcgaactcgcgcctgatcggcccgaactgccccggcgtcttgacgccgaacgagtgcaag
atcggcatcatgccgggcaacatcttccagaagggttccgtcggcattctgtcgcgctcg
ggcacgctaacctatgaagcggtgttccagaccaccaatgaaggtctcggccagtcgacc
gcggtcggcattggcggcgatcccgtcaagggcaccgagttcatcgacgttttggagatg
ttccttgccgatgacgagacgaagtctatcgtgatgatcggtgagatcggcggttcggca
gaagaagaagctgccgaattcctgcgcgatgaagccaagaagggccgcaagaagccgatg
gccggcttcatcgcgggccgcaccgcccctcccggacgcaccatgggccacgcaggcgcc
gtgatttccggcggcaagggtggcgcagaagacaagatcgcggcgatggaagcagccggc
atcaaggtttcgccctccccggcgcgccttggccagacgctcgtcgaagcgatcaagggt
tag
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