KEGG   Nitratireductor rhodophyticola: T8J41_08380
Entry
T8J41_08380       CDS       T09622                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
nrh  Nitratireductor rhodophyticola
Pathway
nrh00300  Lysine biosynthesis
nrh00470  D-Amino acid metabolism
nrh01100  Metabolic pathways
nrh01110  Biosynthesis of secondary metabolites
nrh01120  Microbial metabolism in diverse environments
nrh01230  Biosynthesis of amino acids
Module
nrh_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:nrh00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    T8J41_08380 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    T8J41_08380 (dapF)
Enzymes [BR:nrh01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     T8J41_08380 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PmbA_TldD_2nd
Other DBs
NCBI-ProteinID: WPZ15800
LinkDB
Position
1788241..1789122
AA seq 293 aa
MALEAAFAKMNGLGNAIIVADMRGRADRVTPEAARALNADPATRFDQIMAIHDPRLAGTH
NYIEIINSDGSQAQACGNGTRCVVQALAAETGEKVFTFQTIAGILNAEEHEDGLISVDMG
KPRFGWQDIPLAEEFRDTRMIELQAGPIDAPVLHSPSVASMGNPHAIFWVERDVNVYDLE
RFGPLLENHPIFPERANISIAQVTAENAMNLRTWERGAGLTLACGSAACAAAVSAARTGR
TGRHVTVTVPGGPLDILWREDDHVIMTGPAEWEFSGRFDPATGAWERETEGAA
NT seq 882 nt   +upstreamnt  +downstreamnt
atggcgctcgaggcagcatttgcaaagatgaacggcctcggcaacgcgatcatcgttgcc
gatatgcgtggccgcgcggaccgggtgacgcccgaggccgcgcgcgcgctcaatgccgat
ccggctacgcgcttcgaccagatcatggcgatccatgacccgcgccttgctggcacccat
aactatatcgaaatcatcaattccgatggcagccaggcgcaggcctgcggcaatggcaca
cgatgtgtcgtgcaggcgcttgccgccgaaaccggcgagaaggttttcaccttccaaacc
attgccggcattctgaacgccgaggagcatgaggacgggctgatctctgtcgatatgggt
aagccacggttcggctggcaggacattccgttggccgaagagttccgcgacacgcgcatg
atcgagttgcaggccgggcccatcgatgcgccggtgctgcattcgccttccgttgcctcc
atgggcaacccccatgcgatcttctgggtcgagagagacgtcaatgtctacgatctggag
cggtttgggccgctgcttgaaaaccatccgatcttcccggaacgtgccaacatctccatc
gcgcaagtgacagccgaaaatgcgatgaacctgcgcacatgggaacgcggggctgggctt
acgctcgcctgcggttctgcggcctgcgcggctgcggtgtctgccgcgcgaaccgggcgc
acgggccggcacgtgacggtcaccgttccgggtgggccgctcgacattctgtggcgcgaa
gacgatcacgtcatcatgaccggtcccgccgaatgggaattctccggccgtttcgacccc
gccaccggggcctgggagcgcgagaccgagggagcagcctga

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