Nitratireductor rhodophyticola: T8J41_12315
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Entry
T8J41_12315 CDS
T09622
Name
(GenBank) isopeptide-forming domain-containing fimbrial protein
Organism
nrh
Nitratireductor rhodophyticola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
DUF7507
GramPos_pilinBB
SpaA_4
REJ
Motif
Other DBs
NCBI-ProteinID:
WPZ12961
LinkDB
All DBs
Position
2604337..2614245
Genome browser
AA seq
3302 aa
AA seq
DB search
MLTVGVNEGNATHRWRGWFCSNTANSAASGVHRQAGGRGYDGINVYCGQLEQSRHSAFLM
FADFAWDQTVGGAGWLVNLTKDDVLLDNGNGQTGENVDPYISATANDPAVYNPPSELYVL
PGTGYGATTSQRPAGIPENSFAQTGSCVDNVTRADQEDGSCSLTIAGRPDLSIAISTPTG
VYNAPGDTMNMTVSATNLGPGTVEASDGFAISIAVPTGWTASPVPGCTVSGQTVSCAVNT
SLAPAAVPGGAGGDITFTIPLVANSEAVSGSHPLIASLDRTASDGDGDPTNDDFDTTNDQ
AQGTIEFVKLPRLTVRKATFDDVGSFTFTGNNGWQSQTITTVSEGVAERGDTQILSEVGV
ETVISETLPPNWVLDDVICLGIGSGGTVSFDDNSFTLSSEAVAVDSEIDCTVVNQKVLLS
TSKASDVGDGVGVQAGDTITYTLTSVVTGGTTTQDLVLTDVLGTGLDFGSVTAAGAFVAD
TGGAPALSFTLPAGTAAGTYSVSYTATVSDSAPGSVSNAVTADVGDCSLCATSNPLVELS
TSKASDVGDRVGVQAGDTITYTLTSVVTGGTTTQDLVLTDVLGAGLDFGSVTAPGVFVAD
TGGAPTLSFTLPAGTSAGTYSVSYTATVSDSASGSVSNAAEADVGDCNPCATANPLVELS
TSKASDVGSGVGVQAGDTITYTLTSVVTGGTTTQDLVLTDVLGTGLDFGSVTAPGAFVAD
TGGAPTLSFTLPAGTVAGTYSVSYTATVSDSASGSVSNAVTADVGDCNPCATSNPLVELS
TSKASDVGDGVGVQAGDTITYTLTSVVTGGTMTQDLVLTDVLGAGLDFGSVTAAGAFVAD
TGGAPALSFTLPAGTAAGTYSVSYTATVSGRASGSVSNVVTADVGGCSPCATANPLVELS
TSKASDVGNGVGVQTGDTITYTLTSVVTGGTTTQDLVLTDVLGTGLDFGSVTAAGAFVAD
TGGAPTLSFTLPAGTSAGTYSVSYTATVSDSASGSVSNAAEADVGDCNPCATANPLVELS
TSKASDVGNGVGVQTGDTITYTLTSVVTGGTTTQDLVLSDVLGAGLDFGSVTAAGAFVAD
TGGAPTLSFTLPAGTAAGTHSVSYTATVSDGASGPVSNAVTADVGDCSLCATSNPLVELS
TSKASDVGNGVGVQAGDMITYTLTSVVTGGTTTQDLVLSDVLGAGLDFGSVTAPGAFVAD
TGGAPTLSFTLPAGTAAGTYSVSYTATVSDGASGSVSNAVTADVGNCSLCATSNPLVELS
TSKASDVGNGVGVQAGDTITYTLTSVVTGGTTTQDLVLSDVLGAGLDFGSVTAPGAFVAD
TGGAPTLSFTLPAGTSAGTYSVSYTATVSDSASGSVSNAAEADVGDCNPCATANPLVELS
TSKASDVGSGVGVQAGDTITYTLTSVVTGGTTTQDLVLTDVLGTGLDFGSVTAPGAFVAD
TGGAPTLSFTLPAGTVAGTYSVSYTATVSDSASGSVSNAVTADVGDCNPCATANPLVELG
TSKASDVGDGVGVQAGDTITYTLTSVVTGGTTTQDLVLTDVLGAGLDFGSVTAPGVFVVD
TGGAPTLSFTLPAGTSAGTYSVSYTATVSDSASGSVSNAAEADVGDCSPCATSNPLVELR
TSKASDVGSGVGVQTGDTITYTLTSVVTGGTTTQDLVLTDVLGAGLDFGSVTAPGAFVAD
TGGAPTLSFTLPAGTSAGTYSVSYTATVSDSASGSVSNAVTADVGDCSPCATANPLVELS
TSKASDVGDGVGVQAGDTITYTLTSVVTGGTTTQDLILTDTLGAGLDFGSVTAPGSFVPD
TGGAPTLSFTLPAGTSAGTYSVSYTATVSDRASGSVSNAVTANVRDCSPCATANPLVELS
TSKASDVGDGVGVQAGDTITYTLTSVVTGGTTTQDLVLSDVLGAGLDFGSVTAPGTFVAD
TGGAPTLSFTLPAGTAAGTYSVSYTATVSDSASGSVSNAAEADVGDCSPCATANPLVELS
TSKASDVGDGVGVQAGDTITYTLTSVVTGGTTTQDLVLTDVLGAGLDFGSVTAPGAFVAD
TGGAPTLSFTLPAGTSAGTYSVSYTATVSDSASGSVSNAVTADVGDCSPCATANPLVLLS
TSKASDVGDGVGVQAGDTITYTLTSVVTGGTTTQDLVLTDVLGAGLDFGSVTAPGSFVPD
TGGAPTLSFTLPAGTSAGTYSVSYTATVSDGASGSVSNAVTADVGNCNPCTTSNPLVELS
TSKASDVGDGVGVQADDTITYTLTSVVTGGTTTQDLVLTDVLGTGLDFGSVTAAGAFVAD
TGGAPTLSFTLPAGTSAGTYSVSYTATVSDSASGSVSNAVTADVGGCSPCATANPLVELG
TSKASDVGDGVGVQVGDTITYTLTSVVTGGTTTQDLVLTDTLGPGLDFGSVTAPGVFVAY
TGGAPTLSFTLPAGTAAGTYSVSYSATVSDSASGSVSNAVTADVGDCSPCATANPLVELS
TSKASDVGNGVGVQAGDTITYTLTSVVTGGTTTQDLVLTDTLGPGLDFGSVTDIGSFAAD
TGGAPELTFTLPSGTAAGTYSVSYTATVSDNASGPLSNAVVADVGECGSCATENPLVRLN
TTKRSDVGDGANVQIGDTLTYTLTTVVAEGATTQDLILTDTLGTGLEFGNVTNSGPFTAE
TGAAPELSFTLPAGTPAGSHSISYTAVVAENAPVTLSNSVVASNGDCISCSTENHIPPDV
RISKSLVSEDGAVPGLAELGETLIFEIVLTNTGSAADGFSVRDVLDTHLMFVDASDGGVH
AGGIIDWTGLTVPQREGSVDGQLVLTVEASVAERLTETADTLVNLAKKPDAADPECPSEQ
CVVLPLQFPGLSLKKTGGFTDIDGDGLASTGDVLHYEYEVVNTGKIAVTGIRIEDEGPEF
NGHAANGRLSDIRPQTHSLDVGETGHFSATYLLTQADIDNGAGLLEAVRNSAVARGSVVD
GGGEEFQLASNESVFSFTLPAGGKILTISKMAERPTIRRGEQAPFTIVVANNSDVPVRGL
KVEDQLPAGFRFIEGSALIDGAPAAPVVNGRSLLFDDISVEARSSVEIRLSMNAPASIGP
GVYVNTAVLADPLGRRISAEAKASVQIEAEPVFDCGDVIGKVFDDRNRNGYPDDEEPGLP
GVRLAVVEGKLITTDPAGRFHIPCAALPDQRLGTNFVIKLDARTLPSGYRLTTEHVRVVR
LTAGKMTKVNFGASIQRVVRLDLRSDAFVRGTSALSQGWLSGIDQLIQILDREPSVLRLS
YLDNEGSRTLARTRLAWVEKRIRKHWRRWGGRYRLDIETRVLTGKVRPPGYSGFELDAAA
ER
NT seq
9909 nt
NT seq
+upstream
nt +downstream
nt
gtgctgacagtcggtgtaaacgagggcaatgccactcaccgctggcgcggctggttttgc
agcaacaccgcgaatagtgccgcttccggcgtccacaggcaggcaggcggacgaggctat
gacggcatcaacgtttattgcgggcagttggaacaatccagacactcagcctttctgatg
tttgccgacttcgcctgggaccagacggtcgggggggcaggctggctggtgaacctcacg
aaggatgatgtccttctggacaacggaaacggtcagacgggtgagaatgttgatccatac
atatctgctacggcaaacgatccggcagtgtataacccgcccagtgagttatatgtgctg
ccgggtaccggttacggggcgacaacctcccagagacctgccggcattccggaaaactcc
tttgcacaaacaggtagttgtgtagacaacgtcacgcgcgcggatcaggaagacggtagc
tgttctctcacaattgccggtcgccccgacctttcgattgccatctcgacgccgacgggt
gtctacaatgcacccggcgatacgatgaacatgacggtgagtgccaccaatctgggcccg
ggtaccgtcgaagcttcggatgggtttgccatcagtattgccgtgccgaccgggtggacg
gccagtccggttcctggatgtacggtttccgggcagacggtgtcatgcgcggtgaacacg
tcgctggcgcctgctgccgtccccggaggggcaggtggagacatcactttcaccatcccg
ttggttgccaattctgaggcggtttcgggaagccaccccctcatcgcctcgcttgatcgc
actgcttctgacggagatggcgatccgacaaacgatgatttcgatacgaccaacgaccag
gcacagggcacgatcgagtttgtgaaactgccgagattgacggtccgcaaggcgaccttt
gacgatgtgggcagctttaccttcactggcaacaatggctggcaaagtcagacgatcacg
acggtgtcggaaggcgttgcggagcgtggcgatacgcagatcctgtcagaagtcggcgtc
gaaacggtcatctccgagaccctgccgcccaactgggttctcgatgacgttatctgcctc
gggatcggatccgggggaacggtctccttcgacgataattcctttacgctctcatccgag
gcggtggctgtcgacagcgagattgactgtacggtggtcaatcaaaaggtgctgctcagc
acgtccaaggcatcggatgtgggcgatggtgttggcgttcaggcgggggacacgattacc
tacacgctgacgagcgtggtcaccggagggacgacgacacaggatctggttctgaccgat
gtgctggggacggggctcgacttcggaagcgtgacagcggccggtgcgtttgttgccgac
acgggaggtgcgccggccctgtcgttcacgcttcctgcagggactgcggcgggtacctac
agcgtctcctacacggcgacggtctcggacagtgcacccggctctgtgtcgaatgccgtc
accgcagatgtgggggattgtagcctctgcgcgacgagcaacccgctggtggagctcagc
acgtccaaggcgtccgacgtgggcgatcgtgttggcgttcaggcgggagatacgattact
tacacgctgacgagcgtggtgacaggcgggacgacgacacaggacctggttctgaccgat
gtgctgggcgcggggctcgacttcggcagtgtgacggcacccggtgtgtttgttgccgac
acgggaggtgcgccgaccctgtccttcacgcttcccgccggcacatcggcgggtacctac
agcgtgtcctacacggcgacggtctcggacagtgcgtcagggtcggtatcgaacgcggcc
gaagctgacgttggggattgcaatccctgtgcgacggccaatccgctggtggagctcagc
acctccaaggcatcggatgtaggtagcggcgtgggcgttcaggcgggagatacgattact
tacacgctgacgagtgtggtgacaggcgggacgacgacacaggatctggttctgaccgat
gtgctgggaaccgggctcgacttcggcagcgtgacagcgcccggtgcgtttgttgccgat
acgggtggggcgccgaccctgtcgttcacgcttcccgcggggactgtggcaggaacgtat
agcgtttcctacacggcgacggtctcggacagtgcttccggctcagtgtcgaatgccgtc
accgcagatgtaggagactgcaatccctgtgcgacgagcaatccgctggtggaactcagt
acgtcgaaggcgtccgacgtgggcgatggtgttggcgttcaggcgggggacacgattact
tacacgctgacgagtgtggtgacaggcgggacgatgacacaggacctggttctgaccgat
gtgctgggcgcgggccttgacttcggaagcgtgacagcggccggtgcgtttgttgccgac
acgggaggtgcgccggccctgtcgttcacgcttcctgcagggactgcggcgggtacctac
agcgtctcctacacggcgacggtctcgggcagggcttccggctctgtgtcgaatgtcgtt
acggcagatgtggggggctgcagcccctgcgccacggcgaacccgctggtggaactcagc
acgtccaaggcatcggatgtgggtaacggcgtgggggttcagacgggggacacgattacc
tacacgctgacgagtgtggtgacaggcgggacgacgacacaggacctggttctgaccgat
gtgctggggacggggctcgacttcggcagcgtgacagcggccggtgcgtttgttgccgac
acgggtggtgcgccaaccctgtcgttcacgcttcccgccggcacatcggcgggtacctac
agcgtgtcctacacggcgacggtctcggacagtgcgtcagggtcggtatcgaacgcggcc
gaagctgacgttggggattgcaatccctgtgcgacggccaatccgctggtggagctcagc
acctccaaggcgtccgacgtgggtaacggcgtgggggttcagacgggggacacgattacc
tacacgctgacgagtgtggtgacaggcgggacgacaacgcaggatctggtgctgagcgac
gtgctgggcgccgggctcgacttcggcagcgtgacagcggccggtgcgtttgttgccgac
acgggaggtgcgccgaccctgtccttcacgcttcccgcggggactgcggcgggaacacac
agcgtgtcctacacggcgacggtctcggacggtgcttccggcccggtgtcgaatgccgtc
accgctgacgttggggattgtagcctctgcgcgacgagcaacccgctggtggagctcagc
acctccaaggcgtccgacgtgggcaacggcgtgggggttcaggcgggggacatgattacc
tacacgctgacgagcgtggtgacaggcgggacgacgacacaggacctggtgctgagcgat
gtgctgggcgccgggctggactttggcagcgtgactgcgcccggggcgtttgttgccgac
acgggaggtgcgccaaccctgtcgttcacgcttcctgcggggactgcggcgggtacctac
agcgtgtcctatactgcgacggtctcggacggtgcatccggctcggtgtcgaatgccgtc
accgctgacgttgggaattgtagcctctgcgcgacgagcaacccgctggtggagctcagc
acgtcgaaggcgtccgacgtgggcaacggcgtgggggttcaggcgggggacacgattact
tacacgctgacgagcgtggtgacaggcgggacgacgacgcaggacctggtgctgagcgat
gtgctgggcgccgggctggactttggcagcgtgactgcgcccggggcgtttgttgccgac
acgggaggtgcgccgaccctgtccttcacgcttcccgccggcacatcggcgggtacctac
agcgtgtcctacacggcgacggtctcggacagtgcgtcagggtcggtatcgaacgcggcc
gaagctgacgttggggattgcaatccctgtgcgacggccaatccgctggtggagctcagc
acctccaaggcatcggatgtaggtagcggcgtgggcgttcaggcgggagatacgattact
tacacgctgacgagtgtggtgacaggcgggacgacgacacaggatctggttctgaccgat
gtgctgggaaccgggctcgacttcggcagcgtgacagcgcccggtgcgtttgttgccgat
acgggtggggcgccgaccctgtcgttcacgcttcccgcggggactgtggcaggaacgtat
agcgtttcctacacggcgacggtctcggacagtgcttccggctcagtgtcgaatgccgtc
accgcagatgtgggagactgcaatccctgcgccacggcgaacccgctggtggagctcggc
acgtcgaaggcgtcggacgtaggcgatggtgttggcgttcaggcgggggacacgattacc
tacacgctgacgagcgttgttactggcgggacgacgacgcaggatctggtgctgaccgat
gtgctgggcgccgggctcgacttcggaagcgtgacagcgcccggtgtgtttgttgtcgac
acgggtggcgcgccgaccctgtcgttcacgcttcctgcagggacatcggcaggaacgtat
agcgtgtcctacacggcgacggtctcggacagtgcgtcagggtcggtatcgaacgcggcc
gaagctgacgttggggactgcagcccctgtgcgacgagcaacccgctggtggagctcagg
acctccaaggcgtccgacgtgggcagtggcgtgggggttcagacgggggacacgattacc
tacacgctgacgagtgtggtcaccggcgggacgacgacacaggacctggttctgaccgat
gtgctgggggcggggctggacttcggcagtgtgacggcgcccggggcgtttgttgccgac
acgggtggcgcgccgaccctgtcgttcacgcttcccgccggcacatcggcgggtacctac
agcgtgtcctacacggcgacggtctcggacagtgcatccggctccgtgtcgaatgccgtc
accgcagatgtgggggattgcagtccctgtgcgacggccaatccgctggtggaactcagc
acgtcgaaggcgtctgacgtgggcgatggtgtcggggttcaggcgggcgacacgattacc
tacacgctgacgagcgtggttaccggaggaacgacgacgcaggatctgatcctgacagac
acgctgggggcggggctggacttcggcagtgtgacggccccgggttccttcgttcctgat
acgggtggtgcgccgactctgtcgttcacgcttcccgccggcacatcggcgggtacctac
agcgtgtcctacacggcgacggtctcggacagggcttccggctctgtgtcgaatgctgtc
accgcaaatgtgagggattgcagtccctgtgcgacggccaatccgctggtggaactcagc
acgtccaaggcatcggacgtgggtgatggtgttggcgttcaggcgggggacacgattacc
tacacgctgacgagcgtggtgacaggcggcaccacaacacaggacctggtgctgagcgat
gtgctgggcgccgggctggactttggcagtgtgacggcgcccgggacgtttgttgccgat
acgggtggcgcgccgaccctgtcgtttacgcttcccgctgggactgcggcgggtacctat
agcgtgtcctacacggcgacggtctcggacagtgcgtcagggtcggtatcgaacgcggcc
gaagctgacgttggggactgcagcccttgtgcgacagctaatccgctggtggagctcagc
acctccaaggcatcggatgtgggggatggtgttggcgttcaggcgggggacacgattacc
tacacgctgacgagcgtggtgacaggcgggacgacgacacaggacctggttctgaccgat
gtgctgggggcggggctggacttcggcagtgtgacggcgcccggtgcgtttgttgccgac
acgggtggcgcgccgaccctgtcgttcacgcttcccgccggcacatcggcgggtacctac
agcgtgtcctacacggcgacggtctcggacagtgcatccggctctgtgtcgaatgccgtc
actgctgacgttggggattgcagtccctgcgccacggcgaacccgctggtgctgctcagc
acctcaaaggcatcggatgtgggggatggtgttggcgttcaggcgggcgatacgattact
tacacgctgacgagcgttgttactggcgggacgacgacacaggacctggttctgaccgat
gtgctgggggcggggctggacttcggcagtgtgacggccccgggttccttcgttcctgat
acgggtggcgcgccgaccctgtcgttcacgcttcccgccggcacatcggcgggtacctac
agcgtgtcctacacggcgacggtctcggacggcgcatcgggctctgtgtcgaatgccgtc
actgcagatgtggggaactgcaatccctgtacaacgagtaatccgctcgtggaactcagc
acctcgaaggcgtccgacgtgggcgatggtgttggcgttcaggcggatgacacgattact
tacacgctgacgagcgtggtcaccggagggacgacgacacaggacctggtgctgaccgat
gtgctggggacggggctcgacttcggcagcgtgacagcggccggtgcgtttgttgccgac
acgggtggtgcgccgaccctgtcgttcacgcttcccgccggcacatcggcgggtacctac
agcgtgtcctacaccgcgacggtctcggacagcgcatccggctcggtgtcaaatgccgtt
acggcagatgtggggggctgcagcccctgcgccactgcgaacccgctggtggagctcggc
acgtccaaggcatcggatgtgggcgatggggtgggtgttcaggtgggcgacacgatcact
tatacgctgacgagcgtggtcaccggaggaacgacgacgcaggacctggttctgaccgac
acgctggggccggggctcgacttcggaagcgtgacagcgcccggtgtgtttgttgcctac
acgggtggcgcgccgaccctgtcgttcacgcttcctgcggggactgcggcgggtacctac
agcgtgtcctactcggcgacagtctcggacagtgcttccggctctgtgtcgaatgccgtc
accgcagatgtgggggattgcagtccctgtgcgacggcgaacccgctggtggagctcagc
acgtcgaaggcttccgacgtgggcaacggggtgggcgttcaggcgggggacacgattacc
tacacgctgacgagcgtggtcaccggaggaacgacgacacaggacctggttctgacagac
acgctggggccgggactcgacttcggcagtgtaacagatatcggatcgtttgccgccgat
accggtggtgcaccggaactcaccttcacgcttccttccggaacggctgccggcacctac
agtgtgtcctatacggcgacggtctctgacaacgcgtcgggaccgttgtccaatgcggtt
gtcgcggatgtgggcgaatgcggttcgtgcgcaacagaaaacccgctggtcaggcttaac
acgacaaagaggtcagatgtcggagacggcgcgaatgtccagatcggggacacactcacc
tacacgctgacaaccgtggttgccgaaggagcgaccacgcaggatctcattctcaccgat
acgctcgggaccgggctcgaattcggcaatgtcacgaattccggcccatttacggcggag
acgggcgcggcgccggaattgtcctttacactgcctgcagggacgccggctggaagccac
agtatcagctatacagccgtcgtggccgaaaatgcgccggtgacgctgtccaacagcgtg
gtcgcaagcaatggagactgtatctcctgcagcaccgaaaaccatatcccgccggatgtg
cgtatttccaagtccctcgtgtcggaggatggtgccgttcccgggctcgcagagcttggg
gaaaccctgattttcgaaatcgttctgaccaatacgggcagcgctgccgacggtttttcc
gttcgtgatgtactggacacgcatctcatgtttgtcgatgcaagcgatggcggcgttcat
gctggcgggatcatcgactggacaggtttaacggttccgcagcgtgagggcagtgttgac
gggcaactcgttctgacagttgaggcctcggtcgccgagcgtcttacggaaacggctgat
acgctcgtcaatcttgccaaaaaacctgatgcggcggacccggaatgcccctccgagcaa
tgcgttgttcttccgctccagtttcccgggctgagcctgaaaaagacgggcgggttcacc
gatatcgatggtgacggcctagcttctacgggtgacgttctccactacgagtacgaagtc
gtcaataccggcaaaatagcggtaacaggtattcggatcgaggacgaaggtccggaattt
aacgggcatgccgcgaacggtcgattgtctgacatacggccgcaaacgcactctctggat
gttggtgaaacagggcatttctcagccacatatcttctcacgcaggccgacatcgacaat
ggtgcaggacttctcgaggctgtcaggaattcagctgtcgcgcgtggctcggttgtggac
ggcggcggcgaagaatttcagctcgcctcaaacgaaagcgtgttctcgtttaccttgcct
gcaggaggcaaaatcctgacaatcagcaagatggccgaaagaccgacaatccgtcggggc
gaacaggcaccgtttacgatcgtcgttgccaacaacagcgatgtgcccgttcgcggattg
aaagtcgaggatcagcttcccgccggattccgcttcattgagggttctgcgctgattgac
ggagcgccggctgccccggtcgttaacggccgctcgctgctgttcgacgacatttccgtg
gaggcgcgaagctccgtcgaaatccgcctgagcatgaacgcgcctgcctccataggtccc
ggcgtctatgtcaatacagcggttctggccgatcctctcggccgccggatctccgcggaa
gccaaagccagcgttcagatcgaagcggaacccgtcttcgactgcggtgacgtgatcggg
aaggtcttcgacgacagaaatcgcaacggatatccagatgacgaggagcccggcctgccg
ggcgtacggctggccgtggtggaggggaagctgataacaaccgacccggccggtcgcttc
cacataccatgcgctgcgctgccagatcagcgcctggggaccaactttgtcatcaagctc
gatgctcgtacgctgccctccggataccggctcacgacggaacatgtgcgtgtggtgcgt
ctgacggcaggaaagatgacgaaggtcaatttcggtgcatcgatccagcgcgttgtgcgg
ctggatctgcggagcgatgctttcgttcgcgggacaagcgctctcagtcagggctggctg
tccggtatcgaccagcttatccagattctcgacagggagccctccgtccttcggctgagc
tatcttgacaatgaaggtagccgaacgcttgcgagaacccgccttgcctgggtggaaaag
cgtatcaggaaacactggcgaaggtggggagggcggtatcgcctcgacattgaaacgcgt
gtgctcaccggcaaagtgcgcccgccgggatattcaggctttgaactggacgcagccgcg
gagcggtga
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integrated database retrieval system
