Nitratireductor rhodophyticola: T8J41_12865
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Entry
T8J41_12865 CDS
T09622
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nrh
Nitratireductor rhodophyticola
Pathway
nrh03420
Nucleotide excision repair
nrh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
T8J41_12865
03430 Mismatch repair
T8J41_12865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nrh03400
]
T8J41_12865
Enzymes [BR:
nrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T8J41_12865
DNA repair and recombination proteins [BR:
nrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T8J41_12865
MMR (mismatch excision repair)
Other MMR factors
T8J41_12865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WPZ13060
LinkDB
All DBs
Position
complement(2733313..2735811)
Genome browser
AA seq
832 aa
AA seq
DB search
MSGFPDDIPFFDEDDPTPPPPAAQKPSGIAARAMAARSGGPDTRYLDALNPEQRLAVETT
EGPVLVLAGAGTGKTRVLTTRIAHILASGRAYPSQILAVTFTNKAAREMKLRIGTLVGEA
IEGMPWLGTFHSIGVKILRKHAELAGLKSSFTILDTDDQIRLLKQIIQAEGLDDKRWPPR
QFAQMIDGWKNKGLAPKEIPEGDARAFANGKGRELYTAYQERLKTLNAVDFGDLLCHPIR
ILRDNPDVLAEYHRRFRYILVDEYQDTNTAQYLWLRLLAQRPKSTEPVNICCVGDDDQSI
YGWRGAEVDNILRFEKDFPGAAVIRLERNYRSTAHILGAASHLIANNEGRLGKTLFTEHS
DPDDPKVKVHAAWDSEEEARAVGEEIEALQVKGHALNDIAILVRASFQMREFEDRFVTLG
LNYRVIGGPRFYERMEIRDALAYFRIVAQAADDLAFERIVNVPKRGLGEASVRQIHDVSR
MREAPLLQAARDLVGTEEMKPKPRASLRTLVDNIERWQGMLDRTPHTELAEIILEESGYT
DMWKNDRSAEAPGRLENLKELIRSMEDYDSLRGFLEHVALVMDAERDEELDAVSLMTLHS
AKGLEFPTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGLTRAKKNLHLWFASNRR
IHGLWQSTIPSRFLDELPEAHVDVAEESSGYGGYSAGQPGRPNPYGRSRFDDQPAFSNSY
ATPGWQRAQKNRTEATARNWGNRSGHQVERIGYGEADSGYGAGRGSVKGRVIEGELVAKS
VSDTPSAFRVGDRVFHLKFGNGNIAAIEGNKLTIDFDKAGQKRVLDGFVQRV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcttccctgacgatattccgttcttcgatgaggacgacccgaccccgcctccc
ccggcagcgcagaaaccttcgggcattgcagcgcgcgccatggccgcgcgctcgggcggt
cccgacacgcgctatctcgatgcgctcaatcccgagcagcgccttgccgtggagacgacc
gaaggtcccgtcctggtgctcgctggcgccggcaccggcaagacacgagttctgaccacc
cgcatcgcgcatattctggcctccggccgcgcctatccctcgcagatcctcgccgtgacc
ttcaccaacaaggccgcccgcgagatgaagctgcgcatcggcacactggtgggcgaggcc
atcgagggcatgccgtggctcggcaccttccactccatcggcgtcaagatcctgcgcaaa
catgcggaacttgcgggcctgaaaagctccttcaccattctcgacaccgacgaccagatc
cgcctcctgaaacagatcatccaggccgaggggctggacgacaagcgctggccgccacgc
cagttcgcccagatgatcgacggctggaagaacaaggggctcgccccgaaggagatcccc
gagggggatgcacgtgccttcgccaatggcaagggccgcgagctttacaccgcctatcag
gagcgcctgaagacgctcaacgccgtcgatttcggcgatctcctgtgccacccgatccgc
atcctgcgcgacaatccggatgtgcttgcagagtatcaccgcaggttccgctacatcctc
gtcgacgagtatcaggacaccaacaccgcacagtatctgtggctgcgcctgctcgcccag
cgccccaagagcaccgagccggtcaacatctgctgcgtcggcgatgacgaccagtccatc
tatggctggcgcggcgccgaggttgacaacatcctgcgcttcgagaaggattttccaggc
gccgctgtcatccggctggagcgcaattaccgctccaccgcgcatattctgggcgccgcc
tcgcatctcatcgccaacaatgaaggccgcctcggcaaaaccctcttcaccgagcattcc
gaccccgacgaccccaaggtgaaggtccacgccgcctgggattcggaagaggaagcccgc
gccgtcggcgaggagatcgaggcgcttcaggtgaagggccacgcgctcaacgacatcgcc
atcctcgtgcgcgcctccttccagatgcgcgagttcgaagaccgtttcgtcacgctgggg
ctcaactaccgcgtcatcggcggcccgcgcttctatgagcgcatggaaatccgcgacgcg
cttgcctatttccgcatcgtcgcgcaggcagccgacgacctcgccttcgagcgcatcgtc
aatgtgcccaagcgcgggcttggcgaagccagcgtccggcagattcacgatgtgtcgcgc
atgcgcgaggcccccctcctccaggccgcgcgcgatcttgtcggcacagaggaaatgaag
cccaagccgcgcgcatcgctgcgcacgctggtcgacaatatcgagcggtggcagggcatg
ctcgaccgcacgccccacaccgaacttgccgagatcatcctcgaggagtccggctatacg
gatatgtggaagaacgaccgctccgccgaagcgccgggcaggctggaaaacctcaaggag
ctgatccgctccatggaggattacgacagcctgcgcggcttcctggaacatgtggctctc
gtcatggatgccgagcgcgacgaggaactcgacgccgtcagcctgatgacgctccattcg
gccaagggtctcgaattccccaccgtgttcctgcccggctgggaggaaggcctcttcccc
caccagcgcgccctcgatgagggcgggcgctccggcctcgaggaagagcggcggctcgcc
tatgtgggcctcacccgcgccaagaagaacctgcatctgtggttcgcctccaaccggcgc
attcacggcctctggcaatccaccatcccctcgcgcttcctcgacgagcttcccgaagcg
cacgtggatgtggccgaagaaagcagcggctatggcggttattccgccggtcagcccggc
cggcccaacccctatggcagatcccgcttcgacgatcagcccgccttttcaaacagctac
gccacacccggctggcagcgtgcccagaaaaaccggaccgaggcgacggcgcgcaactgg
ggcaaccgctccggccatcaggtggagcgcatcggttatggcgaggcggattcgggctat
ggcgccggacgcggttcggtcaagggccgtgtgatcgaaggagagctggtcgccaaatcg
gtctccgacaccccttccgccttcagggtcggcgaccgggtgttccatctcaaattcggc
aatggcaatatcgcggcaatcgagggcaacaagctcaccatcgatttcgacaaggcgggc
cagaagcgcgtgctcgacggttttgtccagcgggtttag
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