Nitratireductor rhodophyticola: T8J41_14140
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Entry
T8J41_14140 CDS
T09622
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
nrh
Nitratireductor rhodophyticola
Pathway
nrh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T8J41_14140 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nrh03400
]
T8J41_14140 (xth)
Enzymes [BR:
nrh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
T8J41_14140 (xth)
DNA repair and recombination proteins [BR:
nrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
T8J41_14140 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WPZ13296
LinkDB
All DBs
Position
complement(2968340..2969131)
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AA seq
263 aa
AA seq
DB search
MKIATWNINGVKARIDNLLHWLEESSPDIACLQEIKSVDELFPREPIEALGYHVETYGQK
GFNGVALLSKLRFDEVNRGLPGDDGDEQARFIEGVFSTDRGALRVVSLYLPNGNPVDSEK
FPYKLGWMERLEKWSAERLKLEEPLVLAGDYNVIPEPEDAKNPDAWVGDALFRPESRQAF
RRLGALGFTDALRAVNQDDGIYTFWDYQAGAWQKNNGIRIDHLMLSPEAADHLGSVTVEK
HTRGWEKPSDHVPVVLDLKLRPA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgctacctggaacattaacggcgtcaaggcacgcatcgacaatcttctgcac
tggcttgaagaatccagcccggacatcgcctgtctgcaggagatcaaatccgtggacgag
ctctttccacgcgaaccgatcgaagcgctcggctaccatgtggagacctacggccagaaa
ggcttcaacggtgtggcgctcctctcgaaactgcgcttcgacgaggtcaatcgcggcctg
ccgggcgacgatggagacgagcaggcccgcttcatcgaaggcgtattctccaccgacagg
ggggcgcttcgggtcgtctcgctctatctaccgaacggcaatcctgtcgacagcgaaaaa
ttcccctacaagctcggctggatggaacggcttgaaaagtggagtgccgaacggctcaag
cttgaagaaccgctggttctggccggcgactataacgtcatccccgagccggaagacgcg
aaaaaccccgacgcatgggtgggcgatgccctcttccgcccggaaagccgccaggccttt
cggcgtctgggcgctctgggcttcaccgatgcgttgcgcgccgtcaatcaggacgacgga
atctataccttctgggattatcaggccggcgcctggcagaagaacaacggcatccgcatc
gatcacctcatgctgtcgccggaagccgccgaccatctgggatccgtcacggtcgaaaag
cacacgcgcggctgggaaaagccgtctgatcacgtccccgtcgttcttgatctgaaattg
cgccccgcctga
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