Nitratireductor rhodophyticola: T8J41_15385
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Entry
T8J41_15385 CDS
T09622
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nrh
Nitratireductor rhodophyticola
Pathway
nrh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
T8J41_15385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nrh03021
]
T8J41_15385
03400 DNA repair and recombination proteins [BR:
nrh03400
]
T8J41_15385
Enzymes [BR:
nrh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
T8J41_15385
Transcription machinery [BR:
nrh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
T8J41_15385
DNA repair and recombination proteins [BR:
nrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
T8J41_15385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
WPZ13522
LinkDB
All DBs
Position
3230611..3231621
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AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFSSKGRTVTTLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIALSMEGEGPKRMVVRKQGPGAVTAGDIQTVG
DVEVLNPDHVLCTLDEGAEIRMEFTVDNGKGYVPADRNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMTIETNGSVTGEDAVAFAARILQDQLALFVNFEEPQKEQPA
EQVAELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVEDWPPENIEELAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaagaactggcaagagcttatcaagccgaacaaggtcgagttttcgtccaag
ggccgcaccgtcaccacgctggtggctgagcctcttgaacgtggcttcgggctgacgctc
ggcaacgcactgcgtcgcgttctgttgtcgtcgctgcgcggcgcggctgtgaccgcggtg
cagatcgatggcgtgctgcacgaattctcgtcgatccccggcgtgcgcgaagatgtgacg
gacatcgtcctgaacatcaaggaaatcgcactctccatggaaggcgagggccccaagcgc
atggttgtgcgcaagcagggaccgggcgccgtgacggctggcgacatccagaccgtgggc
gatgtggaagtcctcaaccccgatcacgtgctgtgcacgctggacgagggcgcggaaatc
cgcatggagttcaccgtcgacaacggcaagggctatgtcccggctgaccgcaaccgtgca
gaagatgcgccgatcgggcttattccggtcgacagcctctactcgccggtcaagaaggtc
tcttacaaggttgagaacacccgcgagggtcaggttctcgactatgacaagctgaccatg
accatcgagaccaacggttcggtgacgggcgaggacgcagtggcttttgccgcgcgcatc
ctgcaggaccagctggcgctgttcgtcaacttcgaagagccgcagaaagagcagcccgcc
gaacaggtggctgagcttgctttcaacccggcgcttctcaagaaggtggacgagctggag
ctttcggttcgctctgcaaactgcctgaagaacgacaacatcgtgtatatcggcgacctg
atccagaagacggaagccgagatgctgcgcacgccgaacttcggccgcaagtcgctcaac
gaaatcaaggaagtgctggcctcgatggggctccacctcggcatggaagtcgaggattgg
ccgccggaaaacatcgaagaactcgccaagcgttacgaagaccaatactag
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