Nitratireductor rhodophyticola: T8J41_15585
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Entry
T8J41_15585 CDS
T09622
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nrh
Nitratireductor rhodophyticola
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nrh03032
]
T8J41_15585 (gyrA)
03400 DNA repair and recombination proteins [BR:
nrh03400
]
T8J41_15585 (gyrA)
Enzymes [BR:
nrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
T8J41_15585 (gyrA)
DNA replication proteins [BR:
nrh03032
]
Prokaryotic type
DNA Topoisomerases
T8J41_15585 (gyrA)
DNA repair and recombination proteins [BR:
nrh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
T8J41_15585 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WPZ13557
LinkDB
All DBs
Position
3270871..3273660
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AA seq
929 aa
AA seq
DB search
MTDQTTPTGPGEPDDIEPISIIEEMQRSYLDYAMSVIVSRALPDARDGLKPVHRRILYAS
HESGYHWNRKYVKSARPVADVMGKYHPHGDAAIYDALVRMAQDWSMRLPLIDGQGNFGSI
DGDPPAAMRYTESRLTKGAHELLEDIDKETVDFQDTYDGSSSEPKVLPARYPNLLVNGSG
GIAVGMATNIPPHNLSEVINGCVAMIDNPAISLPELQELIPGPDFPTGGLILGRSGIRSA
YETGRGSIMMRGRVAIEPARNDREAIIITEIPYQVNKASMIEKMAELVRDKRIEGISDIR
DESDRQGYRVVVELKRDAVADVVLNQLYRFTPLQTSFGANMVALNGGKPEQMNLLDLLKA
FVHFREEVVSRRTKYLLRKARDRAHVLVGLAIAVANIDEVIKLIRHAPDPQTAREQLMER
RWPAEDVEALILLIDDPRHRINDDGTYNLSEEQARAILELRLQRLTALGRDEIADELNQI
GAEISDYLEILSSRARIQQIVKDELIAVRDEFGTPRRSEITEGGADLDDEDLIQREEMVV
TVTRKGYIKRVPLSIYRAQARGGKGRSGMSTKDEDFVTRLFVANTHTPILFFSSRGIVYK
EKVWRLPVGTPQSVGKFLRNMLPLEEGESITTIMPLPEDEESWGALDVMFATTRGTVRRN
KLSDFVQVNRNGKIAMKLDDPSDEILGVYTCTEDDDVLLTAASGQCIRFCVTDVRVFAGR
NSIGVRGINLAEGDRVISMAILSHVEASPAARAAYLKQAAAERRQASGEDEDIALTNEDL
GEEESLTPERYEELKAREQMVLTVSEFGYGKRSSSYDFRVTGRGGKGIRATDVAKTDEIG
PLIAAFPVEQDDQIMLVSNAGQVIRVPVDGIRIASRATKGVTIFNTAKGEKVVSVERISD
TQTEEEEIASADDAANGEASDQNGDGAAE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaccagacgacgccgaccggaccgggcgagcccgacgacatcgagccgatttcc
atcatcgaggagatgcagcgctcctatctcgattacgcgatgagcgtgatcgtgagccgc
gctcttccggatgcgcgcgacgggttgaagccggtgcaccggcgcattctctatgcctcg
cacgagagcggctaccactggaaccgcaagtatgtgaaatcggcgcgcccggtcgccgac
gtcatgggtaaataccacccccatggcgatgcggcgatctatgatgcgctggtgcgcatg
gcgcaggactggtccatgcgccttccactcatcgacggtcagggcaatttcggctccatc
gacggcgatccgccggcggccatgcgctacaccgagtcgcggctcaccaaaggcgctcac
gagcttctggaagacatcgacaaggaaacggtcgattttcaggacacgtatgatggctcc
tccagcgagccaaaagtgctgcccgcacgctatccgaaccttctggtgaatggttccggc
ggtatcgcggtcggcatggcgaccaacattccgccgcacaatttgtcggaagtcatcaat
ggctgtgtggccatgatcgacaatccggcgatcagcctgcccgagctgcaggagctgatc
ccgggccccgatttcccgaccggcggtctcatcctcgggcggtccggcatccgcagcgcc
tacgagacaggccgcggctcgatcatgatgcgcggcagggtggccatcgaacccgcccgc
aacgaccgcgaagccatcatcatcacggagatcccctatcaggttaacaaggcctcgatg
atcgaaaagatggccgaactggtgcgcgacaagcgcatcgagggcatctccgacatccgc
gacgaaagcgaccgacagggctatcgcgtcgtggtcgagctgaagcgcgacgccgtcgcc
gatgtcgtgctgaaccagctttatcgcttcacgccgctgcagacgtcttttggcgcaaac
atggtcgcgctcaacggtggcaagcccgagcagatgaacctgctcgatctcctgaaggcc
tttgtccatttccgcgaggaagtcgtcagccggcgcacgaaatatcttctgcgcaaggcg
cgcgaccgtgcgcatgtgctggtcggtctcgccatcgccgtcgccaatatcgacgaggtg
atcaagcttatccgtcatgcgcccgacccgcagacggcgcgcgaacagctgatggagcgc
cgctggccggcggaggatgtcgaagccctcattctcctgatcgatgatccgcgccaccgc
atcaacgacgatggcacctataatctgtcggaagagcaggcgcgtgcgatcctcgaactg
cgcctgcagcgtctgacggcgctcgggcgcgatgaaatcgccgacgaactgaaccagatt
ggcgcggaaatcagcgattatctggaaatcctgtcgtcgcgggcgcgtattcagcagatc
gtcaaggacgaactcatcgccgtccgcgacgagtttggcacaccgcgtcgctccgagatc
accgaaggtggtgcggacctggacgacgaagacctgatccagcgtgaggaaatggtcgtt
accgtcacgcgcaagggctatatcaagcgcgtgcccctctccatctaccgagcgcaggcg
cgcggcggcaagggccgttcgggcatgtcgaccaaggacgaggacttcgtcacgcggctg
tttgtggccaacacgcacacgcccattctgttcttctcctcgcgcggcatcgtctacaag
gaaaaggtctggcgcctgccggttggtacgccgcaatccgtcggcaaattcctgcgcaac
atgctgccgctcgaggagggcgagagcattacgacgatcatgccgctgccggaggacgag
gagagctggggcgcgctcgacgtcatgttcgccaccacgcgtggcacggtgcgccgcaac
aaactgtccgatttcgtccaggtcaaccgcaatggcaagatcgccatgaagctggatgac
ccgagcgacgagattctcggagtttacacctgcacggaagacgacgacgtgcttctgact
gcagcgtcgggccagtgcatccgcttctgcgtcacagatgtgcgcgtctttgccggtcgc
aattcgatcggcgtgcgcggcatcaatctcgccgaaggcgaccgtgtgatttccatggcg
atcctctcgcatgtcgaggcaagtccggccgcacgcgccgcctatctcaagcaggcggca
gcggagcgcaggcaggcaagcggcgaagatgaagacattgccctcaccaatgaggatctc
ggcgaagaggaaagcctgacacctgaacgctatgaggaactcaaggcgcgcgagcagatg
gtgctgaccgtcagcgaattcggctatggcaagcgttcttcaagctatgatttccgggtc
accggccgtggcggcaagggcattcgtgcgacggatgtcgccaagaccgatgagatcggt
cctttgattgcggcgttcccggtggagcaggatgatcagatcatgctggtttcgaacgcg
ggccaggtcattcgtgttccggtcgacggtatccgcatcgccagccgcgcgacaaagggc
gtgacgatcttcaacacggccaagggcgagaaagtagtttcggtcgagcgcatttccgac
acgcagaccgaagaggaagagatcgcctctgccgatgacgccgccaacggagaggcgagc
gaccagaatggggatggcgctgccgagtga
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