KEGG   Nitratireductor rhodophyticola: T8J41_16105
Entry
T8J41_16105       CDS       T09622                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nrh  Nitratireductor rhodophyticola
Pathway
nrh00010  Glycolysis / Gluconeogenesis
nrh00020  Citrate cycle (TCA cycle)
nrh00260  Glycine, serine and threonine metabolism
nrh00280  Valine, leucine and isoleucine degradation
nrh00310  Lysine degradation
nrh00380  Tryptophan metabolism
nrh00620  Pyruvate metabolism
nrh00630  Glyoxylate and dicarboxylate metabolism
nrh00640  Propanoate metabolism
nrh00670  One carbon pool by folate
nrh00785  Lipoic acid metabolism
nrh01100  Metabolic pathways
nrh01110  Biosynthesis of secondary metabolites
nrh01120  Microbial metabolism in diverse environments
nrh01200  Carbon metabolism
nrh01210  2-Oxocarboxylic acid metabolism
nrh01240  Biosynthesis of cofactors
Module
nrh_M00009  Citrate cycle (TCA cycle, Krebs cycle)
nrh_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nrh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nrh_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nrh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    T8J41_16105 (lpdA)
   00020 Citrate cycle (TCA cycle)
    T8J41_16105 (lpdA)
   00620 Pyruvate metabolism
    T8J41_16105 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    T8J41_16105 (lpdA)
   00640 Propanoate metabolism
    T8J41_16105 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    T8J41_16105 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    T8J41_16105 (lpdA)
   00310 Lysine degradation
    T8J41_16105 (lpdA)
   00380 Tryptophan metabolism
    T8J41_16105 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    T8J41_16105 (lpdA)
   00670 One carbon pool by folate
    T8J41_16105 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nrh04147]
    T8J41_16105 (lpdA)
Enzymes [BR:nrh01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     T8J41_16105 (lpdA)
Exosome [BR:nrh04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   T8J41_16105 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_binding_3 HI0933_like NAD_binding_8 FAD_oxidored DAO Lys_Orn_oxgnase 2-Hacid_dh_C GIDA AlaDh_PNT_C Trp_halogenase Thi4 3HCDH_N DUF4659
Other DBs
NCBI-ProteinID: WPZ13653
LinkDB
Position
complement(3373905..3375350)
AA seq 481 aa
MAENYDVIIIGSGPGGYVTAVRAAQLGLKTAIVEREHLGGICLNWGCIPTKALLRSAEIK
HYAENGKDYGLTIDGKISADVNAVVDRSRKVSQRLNGGVGFLMKKNKIDVIWGEAKLSKP
GEVVVSEPSKKAMQPQPPMPKNTKGAGTYKAKHIIVATGARPRVLPGIEPDGDKIWTYFE
AMVPKTMPKSLVVMGSGAIGMEFASFYRTMGADVTVVELMPQILPVEDAEVSKFAKRQFE
KQGIQFKLEAKVAKVEKTKDGITAHIETKDGKVEKISAEKLISAVGVQGNIENLGLESLG
VKTDRGCVAVDGYGRTNVEGIYAIGDVAGPPMLAHKAEHEGVICIEKIAGVPGVHALDKG
LIPGCTYCHPQVASVGLTEAKAKEAGRDIRVGRYQFAANGKAIALGEDQGFVKTIFDKKT
GELLGAHMIGAEVTELIQGFVVAMNLETTEEELMHTVFPHPTLSEMMKESVLDAYGRTLN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
gtggctgagaattacgacgttatcatcatcggatcgggacccggcggctatgtcaccgcc
gtccgcgcggcacagcttggtttaaaaacggcaatcgtggagcgcgagcatctgggcggc
atctgcctcaactggggctgtatcccgacaaaggcgctgctgcgctcggccgagatcaag
cactatgccgagaacggcaaggattacggcctgaccatcgacggcaagatttctgcggat
gtgaatgccgttgtcgaccgctcacgcaaggtctcccagcggctgaatggcggcgtcggc
ttcttgatgaagaagaacaagatcgacgtgatctggggtgaggcgaagctttccaagccg
ggcgaggtggtcgtttccgaaccctccaaaaaggcgatgcagccgcagccacccatgccg
aagaacaccaagggtgccggcacctacaaggcaaagcacatcattgttgcgacgggtgcg
cgtccgcgcgttctgccgggcatcgagccggatggtgacaagatctggacctatttcgag
gcgatggttccgaagaccatgccgaaatcgctcgtcgtgatgggctccggcgccatcggc
atggagttcgcctccttctaccgcaccatgggagcggatgtgacggttgtagagctgatg
ccgcagatcctgccggtcgaggatgcggaagtctcgaagtttgcaaagcgccagttcgag
aaacagggcatccagttcaagcttgaggcgaaagttgccaaggttgagaagaccaaggac
ggcatcaccgcccatatcgagaccaaggacggcaaagtggagaagatttccgccgaaaag
ctgatctccgccgttggcgtgcagggcaacatcgaaaatctcggcctcgaatcgcttggc
gtgaaaacggatcgcggctgtgtggcggtcgacggatacggtcgcaccaatgttgagggc
atctacgcaattggcgacgtggcgggcccgcccatgctggcgcacaaggccgagcatgag
ggcgtgatctgcatcgagaagatcgccggcgtgccgggcgtccatgcgctcgacaagggg
ctgatccccggctgcacctattgccatccgcaggttgcctccgtcggcctcacggaagcc
aaagccaaggaagccggccgcgacatccgggttggccgctatcagtttgccgccaacggc
aaggcgattgcgctcggcgaagaccagggtttcgtcaagacgatcttcgacaagaagacg
ggcgagcttctcggcgcgcacatgatcggcgcggaagttaccgagctcattcagggcttc
gtcgttgcgatgaaccttgagaccacggaagaagagttgatgcacacggtcttcccgcat
ccgaccctgtcggagatgatgaaggagagtgtgctcgatgcctatgggcgtacgctcaac
gcgtaa

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