Nitratireductor rhodophyticola: T8J41_16145
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Entry
T8J41_16145 CDS
T09622
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
nrh
Nitratireductor rhodophyticola
Pathway
nrh00541
Biosynthesis of various nucleotide sugars
nrh01100
Metabolic pathways
nrh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
T8J41_16145 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nrh01005
]
T8J41_16145 (kdsA)
Enzymes [BR:
nrh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
T8J41_16145 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
nrh01005
]
Lipid A
T8J41_16145 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WPZ13661
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Position
complement(3382463..3383293)
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AA seq
276 aa
AA seq
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MKPNPRVTVGKVVFGNDAPLALIAGPCQMETREHAFDMAGALKEITDELGIGLVYKSSFD
KANRTSLSGKRGAGLDAAMPIFADIRKEFDLPVITDVHTEEQCRIVADVVDVLQIPAFLC
RQTDLLIAAAKTGKVVNVKKGQFLAPWDMENVIAKVTESGNPNVMATERGTSFGYNALVS
DMRGLPQMAAMGAPVIFDATHSVAQPGGRGGSSGGQREFVETLARAAVAVGVAGVFMETH
QDPDNAPSDGPNMVPLHEMKGLLQRLMAFDRIAKAA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccaatccgcgtgtgactgtcggcaaggtcgttttcggcaatgacgcgccgctg
gcgctgatcgccgggccctgtcagatggaaacgcgtgagcacgcgttcgacatggcaggc
gcgctcaaggaaatcacggatgagctgggaatcggcctcgtctacaagagcagcttcgac
aaggccaaccgcacctctctctccggaaaacgcggggcggggctggatgcggccatgccg
atcttcgccgacattcgcaaggagttcgatctcccggtgattacggacgttcacaccgag
gagcagtgccggatcgtggccgacgtggtcgatgtgctccagatcccggcatttctgtgc
cgccagaccgatctcctgatcgctgcagcaaagaccggcaaggtggtgaatgtgaagaag
gggcagttcctggctccctgggacatggaaaacgtgatcgccaaggtgacggaatcgggc
aatcccaatgtgatggcgaccgagcgcggaacctcgttcggctacaacgcgcttgtctcg
gacatgcgcggcctgccgcagatggcggccatgggcgcaccggtcatcttcgatgcaacc
cactccgtcgcccagccgggcggccgtggcggctcatccggcggtcagcgcgaattcgtg
gaaacgcttgcgcgcgctgcggttgcggtcggcgttgccggtgttttcatggaaacgcat
caggaccccgacaacgcaccctctgatggtccgaacatggtgccgctccacgagatgaag
gggcttcttcagcgcctcatggcgttcgaccggatcgcaaaggctgcctga
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