Nitratireductor rhodophyticola: T8J41_17725
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Entry
T8J41_17725 CDS
T09622
Symbol
ampH
Name
(GenBank) D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
KO
K18988
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:
3.4.16.4
3.4.21.-]
Organism
nrh
Nitratireductor rhodophyticola
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nrh01002
]
T8J41_17725 (ampH)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nrh01011
]
T8J41_17725 (ampH)
Enzymes [BR:
nrh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
T8J41_17725 (ampH)
Peptidases and inhibitors [BR:
nrh01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
T8J41_17725 (ampH)
Peptidoglycan biosynthesis and degradation proteins [BR:
nrh01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
T8J41_17725 (ampH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
WPZ13950
LinkDB
All DBs
Position
complement(3707812..3708966)
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AA seq
384 aa
AA seq
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MLHWNGRGLRAVAFALAGSIGLAQSSFAEDRVLSEAVEFSGQVLYLQTDVPGLVIGAVRN
GETAVFGFGETAKGSGKTPDGDTLMRVGSVTKVFTGAVLASLVADGSVKFTDRLQDRLGW
NVTVPAMDDKPIRLIDLATHTSGLPREVDREPGPENDPFSTLTKETYEKALAEGVQLFPA
GTGGLYSNFGFDMLAAALGSAAGKPYDALLAERVLEPLGMTDTTFAPSEGDRDRLMQGHN
FDGSPLPDVPNTPVMSGASGLYSTANDMVKWLKWHLDRFSPEMAEMRFLDHAAYVQRDAL
DPTYGFDESGHMDAMGLGWIVMQPEGDRPLILQKAGGLQGMFVYHAFAPTRGVGVFVAIN
EFDFSASMLMAEVVNGLISDLAPR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgctgcactggaacggaaggggtcttcgggctgtcgcgtttgcgctggctggatcgatc
ggcctggcgcagtcctctttcgcagaggacagggtgctgagcgaggcggtcgagttctcc
ggccaggtgctctacctgcagaccgacgtacccggtctcgtgatcggtgcggtgcgcaat
ggcgaaaccgcggtgttcgggtttggcgaaacggcgaaaggaagcggcaagacgcccgac
ggcgacacgctgatgcgcgtcggctccgtgaccaaggttttcacaggtgcagtgctggcg
agccttgtcgccgatggttcggtgaaattcaccgaccggctgcaggaccgcctcggctgg
aacgtgaccgttccagcgatggacgacaagccgatccgcctgatcgatctggcaacgcac
acctcgggcctgccacgcgaagtcgaccgggagccggggccggagaatgatcctttctcc
acgctgacgaaagagacctatgagaaggcgctggcagagggcgtgcagctctttccggcg
ggaaccggcgggctctattccaatttcggctttgacatgctggccgctgctctcggctct
gccgcaggcaagccctatgatgcgttgcttgcagagcgtgttctggagccgctcggcatg
acagacacgacttttgcaccgtccgagggggatcgtgaccggttgatgcaggggcataat
ttcgatggctcgccactgccagatgtgcccaacacaccggtcatgtcgggggcgagtggg
ctctattcaaccgccaacgacatggtgaagtggctaaaatggcatctcgaccgtttttcg
ccggaaatggcggagatgcggtttctcgaccacgcggcctatgtgcagcgcgatgcgctc
gatcccacctatgggtttgacgaatccggccacatggacgcgatgggccttggctggatc
gtgatgcagccggagggcgatcgtccgctgatcctgcagaaggcgggcggcctgcagggc
atgttcgtctatcacgcctttgccccgacgcgcggggtgggcgtgtttgtggcgatcaac
gagttcgatttttctgcctccatgctgatggcggaggtggtgaacggcctgatttccgac
ctcgctccgcgttga
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