Nitratireductor rhodophyticola: T8J41_18415
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Entry
T8J41_18415 CDS
T09622
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
nrh
Nitratireductor rhodophyticola
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nrh01011
]
T8J41_18415
Enzymes [BR:
nrh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
T8J41_18415
Peptidoglycan biosynthesis and degradation proteins [BR:
nrh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
T8J41_18415
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Ntox3
TrmB
Motif
Other DBs
NCBI-ProteinID:
WPZ14079
LinkDB
All DBs
Position
3842751..3844826
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AA seq
691 aa
AA seq
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MTTKAAFASLLLLSVSPLAHAQALPDMGPIPFARPDAVNSPAAAIDALTNTTAVRPNVMD
GQGGPSANERALIVGLDALSLSDPATARTLRNHMKEDSLERRVLTWAMALSASDTFSSGE
IAAIARELGDWPGMLTLREHAERALYRENQRPRVVVSLLGDTEPRTLEGTMVLARSYAAL
GEEEKARALVSGFWRKAKLDATGETAFLEAFGDLLSRTDHRVRMEQMLYDTRVRSAERVA
ERAGGAALTKAWAAVIRGDRNAENLLDAVPEAERSAGYIFAKTRFLRRAGRFDEAARLML
TAPRDAESLIDPDEWWVERRVLSRELLDTGDAETAYRVAAAHSAESPSRAADAEFHAGWY
ALRALKDAQKAAPHFARIAEIAEGPISNARANYWLGRAVEAGAPGDATASYEEAARFGAT
FYGQLATARLGRAALAADAPEPDDEDRRHFFAREMVRAIQSLEKTNHVWRAGSLYRKLAE
TLDKPGELTLLARMAEARGDYTTALRVGKIAAGRGLDIGALAHPVGAIPAAAAIPTTRQA
LAYAIARQETEFNPAAVSPAGARGLLQLMPATAREMARKSGLPYSRARLTTDPTYNATLG
AAYLEEQLARFNGSYILTFAGYNAGPSRAAEWMERYGDPRGKPVDDIVDWIERIPYSETR
NYVQRVMENLQIYKMRLTGRFDIVADISAGS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaaggctgcgtttgcttcgctgcttcttctttcagtctcgccactcgcgcat
gcgcaggccctgccagacatgggcccgatccctttcgcacgccccgacgcggtcaactcg
cctgcagccgccatcgatgctctgacgaacaccaccgccgttcgcccgaatgtgatggac
ggccagggcgggccatcggcaaacgaacgcgccctgatcgtcgggctcgatgccctttcg
ctcagcgatccggcaaccgcgcgcacccttcgcaaccacatgaaggaagacagtctcgaa
cggcgggttctaacctgggccatggcactttcggcgagcgacacattctcgagcggcgag
atcgcggccatcgccagggagcttggcgactggcccggcatgctgacactgcgcgagcac
gccgagcgcgcgctctatcgcgagaaccagcgaccgcgtgtggtggtgagcctgcttggc
gacacggagcccagaaccctcgagggcacgatggtgctcgccaggtcctatgcagctttg
ggagaggaggagaaggcgcgcgcgcttgtctccgggttctggcgaaaggcaaagctcgat
gcgacgggtgaaacagcctttctggaggcattcggtgatctgctttcaaggaccgaccac
cgggtgcgcatggagcagatgctgtacgacacgcgggtgcgttcggccgaacgggttgcg
gaacgcgccggcggcgcggccctgacaaaggcgtgggcggcggtaattcgcggtgacagg
aatgcggaaaacctgctcgacgccgtgcctgaggcggaacgcagcgccggatacatcttt
gccaaaacacgcttcctgcgccgtgccgggcgcttcgatgaagctgccaggctgatgctg
acggcgccacgggatgcggaaagcctgatcgatccggacgaatggtgggtggaacggcgc
gtgctctcgcgcgaactgctcgacaccggcgatgcggagacggcctacagggtggcggct
gcccactcggcagaaagcccctcgcgcgccgccgacgcggagtttcacgcgggatggtat
gcgctgcgcgccctgaaggacgcgcaaaaggccgcaccgcatttcgcccgcattgcggaa
attgccgagggtccgatctcgaatgcgcgcgcgaattactggctggggcgggcagtggaa
gccggtgctccgggggatgcaaccgcctcctatgaagaggcggcccgcttcggcgcgacg
ttctacgggcaactggcgactgccaggctcgggcgcgccgcgcttgcggccgatgcgccg
gaacccgacgacgaagaccgccgtcatttcttcgcccgcgaaatggtgcgtgcaatccag
agcctggagaagacgaaccatgtgtggcgcgcaggcagcctctatcgaaaactggcagag
acgctggacaagcccggcgaactgaccctgctcgcccggatggcggaggcgcgcggcgat
tacaccaccgccctgcgggtcggcaagatcgcggcaggccgggggctcgacatcggcgca
ctggcgcatccggtgggtgccataccagcagccgccgccatccctaccacccgccaggcg
ctcgcctatgcgattgccaggcaggagaccgagttcaatccggcggcggtttcgcccgcc
ggcgcacgcggcctgctgcagctcatgccggcgacggcacgggagatggcgcgcaagagc
ggccttccctattcgcgggcgcgcctcacaaccgatccaacctacaatgcaacgctgggg
gcagcctatctggaagaacagctcgcgcggttcaacggctcctacattctcaccttcgcc
ggctacaatgccgggccgagccgcgcggccgaatggatggagcgctacggcgatccgcgc
ggaaagccggtggacgacattgtggactggatcgaacgcattccctattcggagacgcga
aactacgttcaaagggtgatggagaacctgcagatctacaaaatgcgtcttaccggccgg
ttcgacattgttgcggatatttccgcaggaagctga
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