Nitratireductor rhodophyticola: T8J41_19330
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Entry
T8J41_19330 CDS
T09622
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
nrh
Nitratireductor rhodophyticola
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nrh03009
]
T8J41_19330
Enzymes [BR:
nrh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
T8J41_19330
Ribosome biogenesis [BR:
nrh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
T8J41_19330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
TRM5-TYW2_MTfase
Fer2
Motif
Other DBs
NCBI-ProteinID:
WPZ14250
LinkDB
All DBs
Position
complement(4037910..4039151)
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AA seq
413 aa
AA seq
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MSETLTIDHLGAQGDGVAASPAGPVYVPFALPGEVLEADVRKGRAAKTILRKAAPERVEP
ACRHFGDCGGCAVQHLESEAYLAWKREKVVSALATRGIKTEVDETLACPPHSRRRVTFTA
RRLGSEVLLGFNAAQSHRIVVVEECPVATPGIVAALEDLRVLAKAIAATPKPFHLTVTET
RTGLDIAAVGAGRLGEKQRRAVIDLALEKGFARLSADGEIIVEGRKPSVMFADVPVAIPP
AGFLQATLAAEEAMAGLVSKHLEGCKHVADLFAGSGTFALRLAQKARVYAAEGDAIALAT
LDIAARQWPSLKPVTAEKRDLFHRPLLTKELAQFDGLVFDPPRAGAEFQCRQIARSEVKR
VAAVSCNPGTLARDLAILVDGGFRVTQVVPIDQFLWSPHVEAVALLEKKPKRR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacgctgacgattgatcatctgggtgcacagggcgacggtgtggcagcctcg
ccggcgggtcccgtctatgtgccatttgctcttccgggtgaagtgttggaagcggacgtg
cgcaaggggcgcgctgcaaagaccatattgcgcaaggccgctcccgagcgtgtggagccg
gcatgccggcattttggcgattgcggcggctgcgcggtgcagcacctcgagagcgaagcc
tatctcgcctggaaacgcgagaaagtggtgagcgcactggcaacacgcggcatcaagacc
gaagtggatgagacgcttgcctgcccgccgcattcgcgccgccgagtaacgtttaccgca
aggcggttgggttcggaagttcttctgggcttcaatgccgcgcaatcccatcgcatcgtc
gtggtcgaggaatgtccggtggcaacacccggcattgtcgccgcgcttgaggacctgcgg
gttctggcaaaggccatagccgcgacgccaaagccctttcacctgacggtgacggaaacc
cgcaccggcctcgacattgcagcggttggcgcgggacggctcggtgaaaaacagcgtcgg
gccgtgatcgatctggcgcttgaaaagggatttgcccggctttcggccgatggcgagatc
atcgtggaaggccggaagcccagtgtgatgtttgcagacgtgccggtggccattccgccg
gcaggctttttgcaggccacgcttgctgcggaagaggcaatggccggattggtgagcaaa
cacctggaagggtgcaagcacgttgccgacctcttcgccggcagtggcacgttcgcgctg
cggctggcgcagaaggcacgggtctatgcggctgaaggcgatgcgattgcgcttgccacg
ctcgatatcgccgcacggcaatggccgtctttgaagccggtgactgcggaaaagcgcgat
ctttttcatcgtccgctgctgacgaaggaactggcgcagttcgacgggctggtgttcgac
ccgccgcgcgcgggggcggagtttcaatgccggcagattgcgcgttcagaggtgaaacgg
gtggctgcggtttcgtgcaatccgggcacgctggcgcgggatctggcgatccttgttgac
gggggcttccgggtcacacaggttgttccgatcgaccagtttctctggtcgccgcatgtg
gaagcggtggcgcttctggagaagaagccaaagcggcgctga
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