Neorickettsia risticii: NRI_0056
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Entry
NRI_0056 CDS
T00951
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nri
Neorickettsia risticii
Pathway
nri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NRI_0056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nri03019
]
NRI_0056
03016 Transfer RNA biogenesis [BR:
nri03016
]
NRI_0056
Enzymes [BR:
nri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NRI_0056
Messenger RNA biogenesis [BR:
nri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NRI_0056
Transfer RNA biogenesis [BR:
nri03016
]
Prokaryotic type
tRNA degradation factors
NRI_0056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
SBBP
Motif
Other DBs
NCBI-ProteinID:
ACT69064
UniProt:
C6V3T8
LinkDB
All DBs
Position
complement(50048..51964)
Genome browser
AA seq
638 aa
AA seq
DB search
MCKLLAHGNRKVLPEIPALIAASAALQLSGIPFSGPVVGVDVNMHGSETTCNEIRETEDG
LELFVACTEESVVMVEAEANEASEEEVVHALSEALKSAKPIFSFINEFVKSVTTVKPVGV
LYDNEELCEKVRAACNAQLESVYNERISSKEERHNKLNQVYANTFARLEDDGYTESEILF
FIRKLEKEIVRKNVLEEGIRPDGRSLTEIRPISIALDYLPGTHGSALFTRGGTQSLVVAT
LGSYQDEQVMDDIDGERRESVLLHYNFLPYAVGEVGALRAPGRREIGHGRLALKAVKAVL
PGKEVFPYTLRLVSEITESDGSSSMATVCGSSLALMDTGVPITKHVAGIAMGLITDGARS
AILSDISGDEDMLGDMDFKVAGTRNGIVALQMDMKVRGISIATIRNALNQALAGRLHILE
KMEHAIAKPREGLKDSAPKILCYKIDKDVVHKVIGSGGKTIRGISSDTSTKIDIDQNNYV
YIMADTEEALMEAKTRVDMASGTSDSNVSQLKIGELYEGKIVSIVDFGLFVVLPNKQEGL
VHISEISRNRVNDIRAEHTEGQSVTVRIKDIGSDGKIKLTMRIDEDRVGSGSGSSPKKRF
GAPPRKNSKDNRSGNSDRGFHERSGSAEGSSIGRKRFF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcaagcttcttgcgcatggcaatagaaaggttctacctgaaataccagctctgatt
gcggcttccgctgcattgcagctctctggaattccgtttagcggtcccgttgtcggggtc
gatgttaacatgcatgggtcggaaacaacatgtaacgagatcagggaaacagaagatggc
ctcgaactctttgttgcttgtacggaggaatcagttgtgatggtggaagccgaagcaaat
gaagcctctgaagaggaggttgtacatgccctttcagaggcgctgaaaagtgcaaaaccg
attttttccttcatcaacgagtttgttaaaagcgttactacggtaaagccggtaggagta
ctctatgacaatgaagagctctgtgagaaggtgcgtgcagcgtgtaatgcacaattagag
agcgtctataatgagaggataagtagtaaggaggagcggcacaacaagcttaaccaggtc
tatgcgaataccttcgctagactggaggatgatgggtacactgagtccgagattttattc
ttcattaggaagcttgaaaaagagatcgtaagaaagaacgttttagaggagggcataagg
ccggatggaagaagcttaacggaaatacgtccaatcagtatcgctctggattaccttcct
ggcactcatggttctgctcttttcactcgtggtggaacacagagtttggtcgtagctacg
ctggggtcttatcaagatgagcaagttatggatgacatcgatggtgaaagaagggagtcc
gtactcttgcactataactttttgccgtacgcagttggtgaagttggtgctctgcgcgcg
ccaggaaggcgggaaatcggccacggacgtttagccctcaaagcagtgaaggctgttctg
ccaggtaaggaggttttcccttatactttgcgtttggtttctgaaattacagaatctgac
ggttcctcttctatggcaacagtgtgtgggtcatctttggctctaatggacactggagtt
cctattacgaagcatgtagcgggaatagctatgggcctaataactgatggggcaaggtct
gccattctgagtgatatttcgggtgatgaagacatgcttggggatatggacttcaaggtt
gcgggtacacggaatggaattgtcgcgcttcagatggatatgaaagtgcgtggcataagt
atagcaacaattaggaatgcactgaatcaggcattggctggaaggttacacatccttgaa
aagatggagcatgcaattgctaagccgcgtgaaggtctaaaggattcagccccgaagata
ctatgttacaagatcgataaggatgttgtgcataaagtgataggcagtggtgggaaaact
attagggggatttcctctgatacctctacaaagattgatatagatcaaaacaactatgtt
tatataatggctgacaccgaggaggcattgatggaagcaaaaactagggttgatatggct
tcaggtacttctgattccaatgtttcgcagctcaaaattggcgaactgtatgaaggaaaa
atagtaagcatagttgacttcgggctgtttgttgttcttccaaataagcaggaaggattg
gtccatattagtgaaattagtaggaacagggttaatgatatacgtgcagaacacaccgaa
gggcagtcagttacggtgcggatcaaggatataggttcagatggaaaaattaagctgact
atgcgcattgatgaggatagagtaggtagtgggagtggctcctcacctaagaagcgtttt
ggagcccctcctagaaaaaatagcaaggataaccgatctggtaacagtgataggggtttt
cacgagaggtccggctctgctgaaggttcgtctattggtagaaagcgatttttctaa
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