Neorickettsia risticii: NRI_0653
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Entry
NRI_0653 CDS
T00951
Name
(GenBank) bifunctional DNA-directed RNA polymerase, beta and beta' chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nri
Neorickettsia risticii
Pathway
nri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NRI_0653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nri03021
]
NRI_0653
03400 DNA repair and recombination proteins [BR:
nri03400
]
NRI_0653
Enzymes [BR:
nri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NRI_0653
Transcription machinery [BR:
nri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NRI_0653
DNA repair and recombination proteins [BR:
nri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NRI_0653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Biotin_lipoyl_2
Apocytochr_F_C
RnfC_N
YnfE
Motif
Other DBs
NCBI-ProteinID:
ACT69624
UniProt:
C6V5G2
LinkDB
All DBs
Position
complement(611922..614846)
Genome browser
AA seq
974 aa
AA seq
DB search
MQNEQPEVWDVLAKVIHQHPVFLNRAPTLHRLSVQAFEPVLIEGKAIQLHPLVCTAFNAD
FDGDQMSVHVPLSIEAQVEARLLVMSTNNVLNPANSRPIIVPSKDIVLGVYYLSLEEKGD
VVHPVTFCATWEAEYAFANGDIGLHTKIKCGIELDGEIKVYTTTFGRLQLFKILPKGVPF
QSINMVLTVRDISNLVDLVYRTCGHGKTVEFADGIMELGFRYATLSGISFGKDDMVVPPT
KAEHVRRANEEVKEYEFQYQEGLITKHEKYNKVVDAWQKCTDLVAKDMMDGISGYESVAE
MNSIFMMAQSGARGSAAQIKQLAGMRGLMAKPSGEIIPNPIISNLREGQGVLEYFNSTHG
ARKGLADTALKTANSGYLTRRLVDVAQDSIIVEEDCGSSNGLVVRATVEGGVVIIPLSDS
IFSRVSATDIIDPSDGSVIVRAGEMFDDKSIERIESLGIDSVRIRSVLTCKSKHGICRKC
YGADLSNRKLVALGEAVGVIAAQSVGEPGTQLTMRTFHVGGAATRRVENSSMVAFCGGKV
KFTNANLITDRDGNYVVLSRSFEILLVDSLGIEHFQGRVQYGGTVYVKEGEVVPIGKKLA
DWDLYTVPIIAEASGTVSYADMIEGVSYNEVHDESTGILNRMVVDWRQAEYSSGLRPRVE
ILDEGGSVATCQHSKDAVYLLPLGAILNVSNGDVVEAGDVIAKITKESTTTRDITGGLPR
VIELFEARKAKVNAVISEIDGYVEFAKDYYKSKRKVIVRSREDKERTYEYLVPKGRHLIV
SEGDFIRRGEPLMDGDPDLHEILRVLGLEALAEYMISEIQRVYRLQGVKINNKHIEVIIR
KMLQKVEITDAGDTTFLIGEQIDKSRVERINEVMASQGLRCCSYIPVLLGITRASLQTES
FISAASFQETTKVLTEAAVAGKVDRLRGLKENIIAGRLLPVGAGYFIDKLKREFIGERQG
KQVSVGVDSDVTSV
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaatgaacagccagaagtctgggatgtacttgcaaaggttattcatcagcacccc
gttttcttgaatagagcacctacactccatagactgagtgtccaagcgttcgagccagtt
cttattgaaggtaaggcaatacaattgcatccgttggtttgtactgcatttaacgctgat
tttgacggtgatcagatgtctgttcacgttcctttgtctattgaggcacaagttgaagct
aggttgcttgttatgtcgacgaataatgtcctcaatccagcgaattcgcggccgattatt
gtcccatctaaggatatagttctaggtgtgtattatctgagcctcgaggagaaaggagat
gttgttcatccggtgactttttgtgctacatgggaagctgagtatgcttttgcaaatggt
gatattgggcttcatactaaaatcaaatgcggaattgaactagatggtgaaataaaggtt
tatacaacaacttttggtagattacagttattcaagattcttccgaaaggcgtgccgttt
caaagtataaacatggtgcttacggttagagatataagcaatctggttgatttagtctat
aggacttgtggtcacggcaaaactgttgagtttgcagatggcatcatggaattgggtttt
aggtatgcgacgctctcaggtatttcctttgggaaagatgatatggttgtgcctccgaca
aaagcggagcatgtgagaagagcaaacgaagaagttaaggaatacgagtttcagtatcaa
gagggtttgattaccaaacacgaaaaatataataaggttgttgatgcgtggcaaaaatgt
acagaccttgtggcaaaagacatgatggacggaatttctgggtacgaaagtgttgcagag
atgaattccattttcatgatggcacaatctggtgctaggggttccgccgcgcaaataaag
cagcttgctggaatgcgtgggctgatggctaagccatccggtgagattatcccgaatccg
atcatatcaaatttgagggaaggacagggcgttttagagtactttaactctacgcatggc
gcccgtaagggactcgcagatacagcattaaaaactgcgaactctggttatctgactcgt
aggctagttgatgtagcacaggattccattatcgttgaagaggattgcggctcctcgaat
gggttagtggttcgtgctactgttgagggtggtgtggtgattataccgctcagtgacagt
atattcagtagagtttccgcgactgatattatagatccatcggatggttccgtcatagtg
cgtgcaggagagatgttcgatgataagtcaattgaaagaatagagtcacttggtatagat
tcggttcggattcgttcggttctcacatgcaaaagtaaacacggtatatgtcgcaagtgt
tatggtgcagatctttcaaataggaagttggttgcccttggtgaagcagtaggtgtgatt
gctgcccagtcggtgggcgaacctggaacgcagctcacgatgagaacattccacgttggt
ggtgcagcgacgcgcagagtggaaaattcgagtatggttgcgttttgtgggggtaaggtt
aagttcacaaacgcgaacttgattacggaccgtgatggcaactatgttgtcttaagtagg
tcgtttgagatcttgctggttgattctcttggtatagaacacttccaaggtagggtgcag
tatggtgggaccgtatatgtcaaagagggtgaggtcgttccgattgggaagaagttagcc
gactgggatttgtacactgtacctataatagcagaagcatccggtacggtatcctatgcg
gatatgatagaaggtgtctcatacaatgaagttcatgatgaaagtaccggcattctaaat
aggatggttgttgattggcgtcaagcagagtactcttcggggttgcgtccgcgtgttgag
atacttgatgagggtggttcagttgcaacgtgccagcactctaaagatgcggtttatcta
ctgccgcttggagcgatacttaatgtgtcgaatggcgatgttgttgaagctggagacgtg
attgcgaagatcacgaaggagtcaacgacgactcgtgatattactggtggtctgcctcgc
gtgatcgagctgtttgaagcaaggaaagctaaagttaacgcagtgattagtgaaattgat
ggctacgttgaattcgcaaaggattactataaatcaaagaggaaagttattgtcaggtcg
cgtgaagataaagaacggacttatgagtaccttgtaccaaagggtagacatttgattgtt
agtgagggtgattttattagaaggggtgagcccctcatggatggtgacccagatttgcac
gagattctcagggtgcttggtttggaggctcttgcggagtatatgattagcgagatacag
cgcgtctacaggttgcagggtgttaaaatcaataataaacatatagaagttataattcgt
aagatgctacaaaaggttgagatcactgatgctggtgatacgactttccttattggggag
cagattgataagtctcgtgtagagcggatcaatgaggttatggcgtcgcaggggttgaga
tgctgttcttatataccagtcctgttaggtattacgagagcaagtttgcagacagagtcg
tttatttcggcagcgtcatttcaggaaactaccaaggtgttaactgaagctgcagttgcc
ggtaaggttgacagactaagaggtctgaaagagaatattatagcaggcaggctgttacct
gttggtgctggatactttatcgataaattaaagcgcgagtttatcggcgaacgacaaggt
aaacaggtgtctgttggagtggatagtgacgtgacctccgtgtag
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