Nocardioides renjunii: SHK17_00355
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Entry
SHK17_00355 CDS
T10238
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
nrn Nocardioides renjunii
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
nrn03012
]
SHK17_00355 (selB)
Translation factors [BR:
nrn03012
]
Eukaryotic type
Elongation factors
SHK17_00355 (selB)
Prokaryotic type
SHK17_00355 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_3rd_SelB
Beta-barrel_SelB
MMR_HSR1
RsgA_GTPase
GTP_EFTU_D2
FeoB_N
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
WQQ22449
LinkDB
All DBs
Position
complement(85991..87727)
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AA seq
578 aa
AA seq
DB search
MHVVATAGHVDHGKSTLVEALTGTHPDRLDEERRRGLTIELGYCWTEWADVGEVAFVDVP
GHERFLTTMLAGVGPVPAALLVVAADDPWMPQAAEHLAALDALGVRHAVVAVTRSDLADP
TAALARASAEVARTGLAGAPVLPVSARTGQGLDDLRSALAAMVAALPAPDPASDVRLWVD
RRFAVRGSGTVVTGTLPAGTVRPGDSLAVGEEVLRVRGVQALGRDRAEVSGVARVALNVS
GRTDALERGSALVTPDAWHHTRVVDVRLTGFGEPPTAPMLHVGAADVTTHCRPLGDSFVR
LTLDRALPLRVGDRAVLRDPGRRLLWGADVLDPDPPRLRRRGAAVRRARQLATGSPGLAG
ELERRGLVHADRLRRLGIAREDAGQLEVGPWLVSPALARALAERVPSLVEEHARAHPLDP
GVPLAVLATRLRLPSPELVRAVVRAPLRITDGRVVAPGGGGLPEAVQRGVDAVRRDLASA
AFAAPTADRLRELGLDERVLGAAERAGLLRRLGSGIVLLPDAPDRAVHLLGTLDQPFTTS
AARERLGTTRRVVLPLLEHLDRAGRTRRLPDDRREVVG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcgtcgccaccgccggccacgtcgaccacgggaagtccaccctggtcgaggcg
ctcaccgggacccaccccgaccgcctcgacgaggagcggcgccgcggcctcacgatcgag
ctgggctactgctggaccgagtgggccgacgtcggcgaggtggccttcgtcgacgtgccc
ggccacgagcgcttcctcaccaccatgctcgcgggcgtgggcccggtgccggcggcgctg
ctcgtcgtcgcggcggacgacccgtggatgccgcaggcggccgagcacctcgcggcgctc
gacgcgctgggcgtgcggcacgccgtcgtggcggtcacccgctccgacctcgccgacccc
accgcggcgctcgcgcgggcgtccgccgaggtcgcgcggaccgggctcgcgggcgcgccg
gtcctgccggtgagcgcccgcaccggccagggcctcgacgacctccgctccgcgctcgcg
gcgatggtggccgcgctgcccgcacccgacccggcctccgacgtgcggctgtgggtcgac
cgccggttcgcggtccgcggcagcggcaccgtggtcaccggcaccctgcccgccggcacg
gtccggcccggcgactccctggccgtgggcgaggaggtgctgcgggtccgcggcgtgcaa
gcgctgggccgcgaccgggccgaggtcagcggggtcgcccgcgtcgccctcaacgtctcc
ggccgcaccgacgcgctcgagcgcggcagcgcgctcgtcacgcccgacgcctggcaccac
acccgcgtggtcgacgtacgcctgaccggcttcggcgagccgcccaccgccccgatgctg
cacgtgggagcggccgacgtgacgacccactgccgcccgctcggcgactccttcgtgcgg
ctcaccctcgaccgcgcgctgccgctccgcgtcggcgaccgggcggtgctgcgcgacccg
ggccgccggctgctgtggggcgccgacgtgctggaccccgacccgccgcggctgcggcgc
cgtggggccgccgtacgacgcgcgcggcagctggccaccggctcgcccgggctggccggc
gagctcgagcgccgtgggctggtgcacgccgaccggctgcgtcgcctggggatcgcccgc
gaggacgccggccagctcgaggtcggcccctggctggtctcccccgcgctggcgcgggcc
ctcgccgagcgggtgccgtcgctggtggaggagcacgcccgcgcccacccgctcgacccc
ggcgtcccgctggccgtgctcgccacgcggctgcggctgccctcgcccgagctcgtccgc
gcggtggtgcgggcgccgctgcgcatcaccgacgggcgggtggtcgccccgggtggcggc
ggcctgcccgaggccgtgcagcgcggcgtcgacgccgtacgacgcgacctggcgtccgcg
gcgttcgcggcgccgaccgccgaccggttgcgcgagctcggcctcgacgagcgggtcctc
ggcgcggcggagcgggccgggctcctgcggcgcctcggcagcgggatcgtgctgctgccg
gacgcccccgaccgggcggtgcacctgctggggacgctcgaccagccgttcaccaccagc
gcggcacgcgagcggctgggcaccacgcgccgcgtcgtcctgccgctgctcgagcacctc
gaccgcgccggccgcacccgacggctgccggacgaccggcgtgaggtcgtcggctga
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