Nocardioides renjunii: SHK17_00865
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Entry
SHK17_00865 CDS
T10238
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
nrn Nocardioides renjunii
Pathway
nrn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SHK17_00865 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nrn02000
]
SHK17_00865 (rhaS)
Transporters [BR:
nrn02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
SHK17_00865 (rhaS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
DUF8542
DUF5983
CdhD
AF_0155
Motif
Other DBs
NCBI-ProteinID:
WQQ22545
LinkDB
All DBs
Position
complement(196711..197754)
Genome browser
AA seq
347 aa
AA seq
DB search
MKLHTKRPTALAALLLTATFAFAGCGGDDSGDGGGSGSEGGGDLSLTMLPKNLGNPYFDT
STAGAEKAAEELGADMEEVGPETASPDAQVSYINTVAQQGQDALILSANDPEALCDAIEE
ARSADVKVVTFDADTNPECRDLFVNQATAEGIAAKQLELISEQIGGEGEIAILSASANAT
NQNAWIEMMETELADNPDYADIELVDTVYGDDEDQKSFDQTEALLQNHPDLKGIISPTTV
GIAAAARYLSDSDAKGKVALTGLGTPNQMREYVENGTVESFALWNPEDLGFLAAYAAAAL
ANGDITGEEGDTFEAGELGEFEVGADGVVLLGEPFTFDAENIGDFDF
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccacacgaagcgcccgaccgcgctggccgcgctcctgctcaccgcgaccttc
gccttcgccggctgcggtggcgacgacagcggtgacggcggcgggtccgggagcgagggc
ggcggcgacctcagcctgaccatgctcccgaagaacctcggcaacccctacttcgacacc
agcaccgccggtgcggagaaggccgccgaggagctcggcgctgacatggaggaggtcggt
cccgagaccgccagccccgacgcccaggtctcctacatcaacaccgtcgcgcagcagggc
caggacgccctgatcctctccgccaacgaccccgaggccctctgcgacgccatcgaagag
gcgcgcagcgccgacgtcaaggtcgtcaccttcgacgccgacaccaaccccgagtgccgc
gacctgttcgtcaaccaggccaccgccgagggcatcgctgccaagcagctcgagctcatc
tccgagcagatcggcggcgagggcgagatcgcgatcctctcggccagcgccaacgcgacc
aaccagaacgcgtggatcgagatgatggagaccgagctcgcggacaaccccgactacgcg
gacatcgagctggtcgacaccgtctacggcgacgacgaggaccagaagtccttcgaccag
accgaggcgctcctgcagaaccaccccgacctcaagggcatcatctccccgaccaccgtc
ggcatcgccgccgccgcccgctacctgtcggactccgacgccaagggcaaggtcgcgctg
accggtctcggcacccccaaccagatgcgggagtacgtcgagaacggcaccgtcgagtcg
ttcgccctgtggaaccccgaggacctcggcttcctggcggcgtacgccgcggcggccctg
gccaacggtgacatcaccggcgaggagggcgacaccttcgaggccggcgagctcggcgag
ttcgaggtcggcgccgacggcgtcgtcctgctgggcgagccgttcaccttcgacgcggag
aacatcggcgacttcgacttctga
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integrated database retrieval system
