Nocardioides renjunii: SHK17_01235
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Entry
SHK17_01235 CDS
T10238
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nrn Nocardioides renjunii
Pathway
nrn03030
DNA replication
nrn03430
Mismatch repair
nrn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHK17_01235
03430 Mismatch repair
SHK17_01235
03440 Homologous recombination
SHK17_01235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nrn03032
]
SHK17_01235
03400 DNA repair and recombination proteins [BR:
nrn03400
]
SHK17_01235
Enzymes [BR:
nrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHK17_01235
DNA replication proteins [BR:
nrn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SHK17_01235
DNA repair and recombination proteins [BR:
nrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SHK17_01235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_14
AAA_30
Rad17
AAA_5
AAA_16
AAA_18
Mg_chelatase
AAA_2
nSTAND3
TsaE
AAA_28
AAA_19
RNA_helicase
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
WQQ22614
LinkDB
All DBs
Position
280165..282414
Genome browser
AA seq
749 aa
AA seq
DB search
MESPLALYRRYRPETFQQVIGQDHVTEPLRAALAANRVNHAYLFSGPRGCGKTTSARILA
RALNCAQAPVSDPCGECDSCRELARGGTGSLDVIEIDAASHNGVDDARDLREKAFFAPVR
DRYKVYIIDEAHMVTPQAFNALLKLVEEPPPHLRFIFATTEPDKVLPTIRSRTHHYPFRL
IPPRLLSDYLSQLATEEGVAIEPAALPLVVRAGAGSARDTLSVLDQLLGGAGPDGVTHKL
TTDLLGFTPDSLLDEVVEAFATRDGASVFSVVDKVVETGQDPRRFTEDLLRRLRDLVIVT
AVPGAPATGLIDVPEDAGERLVAQAARFGAIELSRAADIVAAGLTEMRGATAPRLLLELL
CARVLLPGADHTSEGVMARLERLERRLDVTGAPTPAAQARAAAVPAAAAPATDLPQPVAP
AAPTHAAPPAATPTAPAVTPAAVPAQSRPAPARSDEPAPPPPVPTAAPAEGRDDGPPPPP
PMPSAVPADGHAPSPATSSEPGPQAPPVVAEPAPVAAAPAAPGDPVAEQPAGPRGGLSLV
DVRRLWPDILEQTKNRRRLAWMVLSQHAHVVDVDGTRLTVGFANAGARDSFVNGGCDEIL
RQAAIDIVGMDWRVESIVDPSGAAAEAPVVRQSATAPSPDPTSPSVADLAGRPPGGAAQE
APDGPPSWVTGDAAPPPVAAPQPSVSAAPAREALQAARAGGAPEPSEPVRSADDDVDPDD
PDAESGALDTESLLSQTLGAKLIEEIRND
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
gtggagtcaccgctcgcgctctatcgccgctaccggcccgagaccttccagcaggtcatc
gggcaggaccacgtgacggagcccctgcgcgcggccctcgccgccaaccgcgtcaaccac
gcctacctcttctccgggccccgcggctgcggcaagaccacctcggcgcgcatcctggcc
cgcgcgctcaactgcgcccaggcgccggtctccgacccgtgcggcgagtgcgacagctgc
cgcgagctcgcgcgcggcggcaccggctcgctcgacgtgatcgagatcgacgcggcgagc
cacaacggcgtggacgatgcccgcgacctgcgcgagaaggcgttcttcgcgccggtgcgc
gaccgctacaaggtctacatcatcgacgaggcccacatggtcacgccgcaggccttcaac
gcgctgctcaagctcgtcgaggagccgccgccgcacctccggttcatcttcgccaccacc
gagcccgacaaggtgctgccgaccatccgctcgcgcacccaccactaccccttccggctc
atcccgccgcgcctgctcagcgactacctctcccagctcgccaccgaggagggcgtggcc
atcgagccggccgccctgccgctcgtcgtgcgcgccggtgccggctcggcccgcgacacc
ctgtcggtgctcgaccagctgctcggcggcgccggccccgacggcgtcacccacaagctg
acgaccgacctgctcggcttcacccccgactcgctgctcgacgaggtcgtcgaggccttc
gcgacgcgcgacggtgcctcggtgttctccgtggtcgacaaggtcgtcgagaccgggcag
gacccccgccgcttcaccgaggacctgctgcgccggctgcgtgacctcgtcatcgtcacc
gccgtgcccggcgccccggccaccgggctcatcgacgtccccgaggacgcgggcgagcgg
ctcgtcgcgcaggccgcccggttcggcgcgatcgagctcagccgtgccgccgacatcgtg
gccgccggcctcaccgagatgcgcggcgcgacggctccgcggctcctgctcgagctgctg
tgcgcccgggtgctcctgcccggggccgaccacacctccgagggcgtgatggcccgcctc
gagcgcctcgagcgccgtctcgacgtcaccggcgcgccgaccccggccgcccaggcccgc
gcggcggccgtccccgccgcggccgcgcccgcgacggacctcccgcagcccgtcgccccg
gcggcgcccacccacgcggcgcctcccgcagcgaccccgacggcacctgcagtaacgccc
gcggcagtgcccgcacagtcacggcccgccccggcccggtccgacgagcccgcacccccg
ccgccggtccccaccgcggcgccggcggagggccgggacgacggcccgccgccgcccccg
ccgatgccgtcggcggtgccggctgacggtcacgccccgtcccccgcgacctcgtcggag
cccggtccgcaggcgccgccggtggtcgccgagccggccccggtcgccgcggccccggcc
gccccgggtgacccggtggccgagcagcccgccggtccgcgcggcggcctcagcctcgtc
gacgtacgccgcctgtggcccgacatcctcgagcagaccaagaaccgtcgccgcctcgcg
tggatggtgctctcccagcacgcccacgtggtcgacgtcgacggcacccgcctgaccgtg
ggcttcgccaacgccggtgcccgcgactcgttcgtcaacggcggctgcgacgagatcctg
cggcaggccgccatcgacatcgtcggcatggactggcgcgtcgagtcgatcgtcgacccc
tcgggcgccgccgcggaggccccggtcgtgcgccagtcggccaccgcgccgtcccccgac
ccgacctcgccgtccgtggccgacctcgccggccgcccgcccggcggcgcggcccaggag
gcccccgacggcccgccctcctgggtgacgggcgacgccgccccgccccccgtggccgcg
ccccagccctcggtctcggcggcgccggcccgcgaggcgctccaggccgcccgcgccggg
ggtgcgcccgagccgtcggagcccgtgcggtcggccgacgacgacgtcgaccccgacgac
ccggacgccgagtcgggcgccctcgacaccgagtcgctgctcagccagaccctcggtgcc
aagctgatcgaggagatcaggaacgactga
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