Nocardioides renjunii: SHK17_03480
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Entry
SHK17_03480 CDS
T10238
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
nrn Nocardioides renjunii
Pathway
nrn00900
Terpenoid backbone biosynthesis
nrn01100
Metabolic pathways
nrn01110
Biosynthesis of secondary metabolites
Module
nrn_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SHK17_03480 (ispF)
Enzymes [BR:
nrn01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
SHK17_03480 (ispF)
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Motif
Pfam:
YgbB
DUF6301
DUF732
Motif
Other DBs
NCBI-ProteinID:
WQQ23039
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All DBs
Position
complement(749149..749634)
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AA seq
161 aa
AA seq
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MTTPLAGARIGIGTDVHRLVPGVPMHLAGLAWPDEPAGLEGHSDADVAAHAACDALFSAA
GIGDLGSNFGTSEPEWAGASGATLLAETARRVRAAGWEIGNVAVQVIGNVPRLGPRREEA
AATLSAAVGAPVTVSATTTDGLGLTGRGEGVAAIATALVTG
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacccccctcgccggcgcgcggatcggcatcggcaccgacgtgcaccggctggtc
cccggcgtcccgatgcacctcgcgggcctcgcctggcccgacgagccggccgggctcgag
ggccactccgacgcggacgtcgcggcccacgcggcctgcgacgcgctgttctccgccgcc
gggatcggcgacctcggcagcaacttcggcacctcggagcccgagtgggccggggcgtcg
ggtgcgaccctgctggccgagaccgctcgccgcgtgcgggcggcgggctgggagatcggc
aacgtcgccgtgcaggtgatcggcaacgtgccgcggctcggccctcgccgcgaggaggcc
gccgccacgctgtccgccgccgtcggcgcccccgtcaccgtctcggcgaccaccaccgac
ggcctcggcctcaccggacgcggcgagggagtcgccgcgatcgccacggccctggtcacc
ggctga
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