Nocardioides renjunii: SHK17_04205
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Entry
SHK17_04205 CDS
T10238
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
nrn Nocardioides renjunii
Pathway
nrn02010
ABC transporters
nrn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SHK17_04205
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SHK17_04205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nrn02000
]
SHK17_04205
Transporters [BR:
nrn02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
SHK17_04205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
WQQ23182
LinkDB
All DBs
Position
complement(890110..891447)
Genome browser
AA seq
445 aa
AA seq
DB search
MSRHNRVAGPLAVALAASLVLGACGAGGRDDSEDGDGSTGAPDPGVTDDSVTIGGTFPLT
GVAAPGYSEIPTGAQAYFDYVNEAGGVHGRTIDYIVKDDAYNPTNTSTVTNELVLQDEVF
ATVGSLGTPTQASVADYLNDEGVPQLMVSSGSLQWGDDVEARPLTFGWQPDYESEGKIIG
QWVAENMPDARVGLFLQDDDLGEDAEKGVRQFVDDQIVAVERYTSGNTDVAPQVTGLQAE
KVDLVLAFNTPSYTALSQLVALKTGFTPTWFYANIGSDPALVGSLLERFSEGAVAGDSAA
LDGVMTSEYIPGIDSADDPWVQLWQEVWDAHGGEGELTNYRIYGMSQAYAFVQALEAAGE
DLTREGLVAAIEEGGADWEGPQLAPFRYSADSHMGIAGMRLVELQGGVGEPLTDVLVTDI
GDAEITTDDSGQADDAPPEGGVPTS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacacaaccgggtcgcaggacccctggcggtcgccctggcggcctcgctcgta
ctcggggcgtgcggcgccggcgggcgcgacgactccgaggacggggacggcagcaccggc
gcccccgatccgggcgtcaccgacgactcggtcaccatcggcgggaccttcccgctgacc
ggcgtggcagccccgggctactcggagatccccaccggcgcccaggcgtacttcgactac
gtcaacgaggccggcggcgtgcacggccgcacgatcgactacatcgtcaaggacgacgcc
tacaaccccaccaacaccagcacggtgaccaacgagctggtgctgcaggacgaggtcttc
gccaccgtcggctcgctcgggacgccgacccaggcctccgtcgccgactacctcaacgac
gagggcgtgccgcagctgatggtctcctcgggctcgctccagtggggcgacgacgtcgag
gcacggccgctgacgttcgggtggcagcccgactacgagtcggagggcaagatcatcggc
cagtgggtcgcggagaacatgcccgacgcgagggtcggcctcttcctccaggacgacgac
ctcggcgaggacgccgagaagggcgtgcgccagttcgtcgacgaccagatcgtcgccgtg
gagcgctacacctccggcaacaccgacgtcgccccccaggtcaccggcctgcaggccgag
aaggtcgacctcgtgctcgccttcaacacgccctcctacaccgcgctgagccagctcgtg
gcgctcaagaccggcttcacgccgacgtggttctacgccaacatcggctccgacccggcc
ctggtcggctcgctgctcgagcggttctccgagggcgcggtcgccggcgactcggcggcg
ctcgacggggtgatgacgagtgagtacatccccggcatcgacagcgccgacgacccgtgg
gtccagctctggcaggaggtgtgggacgcccacggcggcgagggcgagctcaccaactac
cgcatctacggcatgtcccaggcgtacgccttcgtgcaggcgctcgaggcggccggcgag
gacctgacccgcgagggactcgtggcggcgatcgaggagggtggcgccgactgggaggga
ccgcagctcgcgcccttccgctacagcgccgacagccacatgggcatcgccgggatgcgc
ctggtggagctgcagggcggtgtgggcgagccgctcacggacgtgctggtgaccgacatc
ggtgacgcggagatcaccaccgacgactcggggcaggccgacgacgcaccgccggagggc
ggggtgccgaccagctga
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