Nocardioides renjunii: SHK17_04885
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Entry
SHK17_04885 CDS
T10238
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nrn Nocardioides renjunii
Pathway
nrn00020
Citrate cycle (TCA cycle)
nrn00190
Oxidative phosphorylation
nrn00650
Butanoate metabolism
nrn00720
Other carbon fixation pathways
nrn01100
Metabolic pathways
nrn01110
Biosynthesis of secondary metabolites
nrn01120
Microbial metabolism in diverse environments
nrn01200
Carbon metabolism
Module
nrn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nrn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SHK17_04885
00650 Butanoate metabolism
SHK17_04885
09102 Energy metabolism
00190 Oxidative phosphorylation
SHK17_04885
00720 Other carbon fixation pathways
SHK17_04885
Enzymes [BR:
nrn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SHK17_04885
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
NAD_binding_8
GIDA
FAD_binding_3
FGAR-AT_PurM_N-like
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
WQQ24407
LinkDB
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Position
complement(1031645..1033597)
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AA seq
650 aa
AA seq
DB search
MGYYTPGEPLVDGKAPDGPVAERWQNRKFEARLVNPANRRKLSIIIVGTGLAGASAAATL
GEAGYNVKTFCYQDSPRRAHSIAAQGGINAAKNYKEDGDSVHRLFYDTVKGGDYRSRESN
VYRLAEVSTNIIDQCVAQGVPFAREYGGLLDNRSFGGVQVSRTFYARGQTGQQLLIGAYQ
ALERQISTGTVSMFTRHEMLELIVADGKARGIIARDMVTGEIQTHLADVVVIASGGYGNV
FYLSTNAMGSNVTAAWRAHRKGAYMANPCYTQIHPTCIPVSGSHQSKLTLMSESLRNDGR
IWVPKNQADCDKDPRDIPEEDRDYYLERIYPSFGNLVPRDIASRAAKNVCDEGRGVGPEV
DGTRRGVYLDFADAIDRLGRDAVANKYGNLFDMYARITGEDPYAVPMRIYPAVHYVMGGL
WVDYDLQSTIPGLFVTGEANFSDHGANRLGASALMQGLADGYFVLPHTIRDYLADGPFEP
IGEDHPAVVEARESVRARTEHFLSVNGTRSVDSYHRELGNIMWEYCGMERNETGLKKAID
LIRGLRDDYYRNVKVLGASESLNQSLEKAHRVADFFELGELMCVDALNRRESCGGHFRSE
SQTEDGEALRHDEEFAYVAAWEWAGLDEKPILHKEDLVYTAIEMKQRSYK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgggctactacacgccgggcgagccgctggtcgacggcaaggcgcccgacggtcccgtc
gccgagcgctggcagaaccgcaagttcgaggcgcgcctggtcaacccggccaaccgccgc
aagctctccatcatcatcgtcggcaccggcctggccggcgcctcggccgccgccacgctc
ggcgaggccggctacaacgtcaagacgttctgctaccaggactccccgcgccgggcgcac
tccatcgccgcgcagggcggcatcaacgccgcgaagaactacaaggaggacggcgactcc
gtccaccggctgttctacgacaccgtcaagggcggcgactaccgctcgcgcgagtccaac
gtctaccgcctggccgaggttagcaccaacatcatcgaccagtgcgtcgcgcagggcgtc
cccttcgcccgcgagtacggcggcctgctcgacaaccgctccttcggcggcgtgcaggtc
tcgcgcaccttctacgcccgcgggcagaccggccagcagctgttgatcggcgcctaccag
gcgctcgagcggcagatctccaccggcaccgtctcgatgttcacccgccacgagatgctc
gagctgatcgtcgccgacggcaaggcccgcggcatcatcgcccgcgacatggtcaccggc
gagatccagacccacctcgccgacgtcgtcgtcatcgcctccggcggctacggcaacgtg
ttctacctgtccaccaacgcgatgggctccaacgtcaccgccgcgtggcgcgcgcaccgc
aagggcgcctacatggccaacccctgctacacgcagatccacccgacgtgcatccccgtc
tccggctcgcaccagtccaagctgacgctgatgtcggagtcgctgcgcaacgacggccgg
atctgggtgccgaagaaccaggccgactgcgacaaggacccgcgcgacatccccgaggag
gaccgcgactactacctggagcggatctacccctcgttcggcaacctggtcccccgcgac
atcgcctcccgcgccgccaagaacgtctgcgacgagggccgcggcgtcggccccgaggtc
gacggcacccgccgtggtgtctacctcgacttcgccgacgcgatcgaccggctcgggcgc
gacgcggtcgccaacaagtacggcaacctcttcgacatgtacgcccgcatcacgggcgag
gacccctacgcggtgccgatgcggatctaccccgccgtgcactacgtcatgggcgggctg
tgggtcgactacgacctccagtcgacgatccccgggctgttcgtgaccggggaggccaac
ttctccgaccacggcgccaaccgcctcggcgcctccgcgctgatgcagggcctcgccgac
ggctacttcgtcctgccccacacgatccgcgactacctcgccgacggcccgttcgagccc
atcggcgaggaccacccggccgtggtggaggcgcgggagtcggtgcgcgcccgcaccgag
cacttcctgtccgtcaacggcacccgcagcgtcgactcgtaccaccgcgagctcggcaac
atcatgtgggagtactgcggcatggagcgcaacgagaccgggttgaagaaggcgatcgac
ctgatccgcggcctgcgcgacgactactaccgcaacgtcaaggtgctcggcgcctcggag
tcgctcaaccagtcgctggagaaggcgcaccgcgtggccgacttcttcgagctgggcgag
ctcatgtgcgtcgacgcgctcaaccggcgcgagtcctgcggcgggcacttccggtcggag
tcgcagaccgaggacggcgaggcgctgcggcacgacgaggagttcgcctacgtcgccgcc
tgggagtgggccggcctcgacgagaagccgatcctccacaaggaagacctggtctacacg
gccatcgagatgaagcagcggagctacaagtga
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