Nocardioides renjunii: SHK17_04900
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Entry
SHK17_04900 CDS
T10238
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nrn Nocardioides renjunii
Pathway
nrn00020
Citrate cycle (TCA cycle)
nrn00190
Oxidative phosphorylation
nrn00650
Butanoate metabolism
nrn00720
Other carbon fixation pathways
nrn01100
Metabolic pathways
nrn01110
Biosynthesis of secondary metabolites
nrn01120
Microbial metabolism in diverse environments
nrn01200
Carbon metabolism
Module
nrn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nrn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SHK17_04900
00650 Butanoate metabolism
SHK17_04900
09102 Energy metabolism
00190 Oxidative phosphorylation
SHK17_04900
00720 Other carbon fixation pathways
SHK17_04900
Enzymes [BR:
nrn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SHK17_04900
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
Thi4
AlaDh_PNT_C
GIDA
Pyr_redox_3
Lycopene_cycl
FAD_oxidored
NAD_binding_7
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
WQQ23319
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Position
1035395..1037275
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AA seq
626 aa
AA seq
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MTRHEMTGNEMSPEARGGMERHTYDVVVIGAGGAGLRAAIAAQEAGARTAVVCKSLLGKA
HTVMAEGGAAAALGNRWPEDSWKVHFRDTMRGGKMLNNWRMAQLHAQEAPERVLELEDWG
ALFDRTEDGLISQRDFGGHRYARLAHVGDRTGLELIRTLQQRTVQLGIDVFMECTVTDVL
KEAGDRQGRVAGAFAYWRETGRFITFEAPSVILATGGIGKSYKVTSNSWEYTGDGHALAL
RAGASLINMEFVQFHPTGMVWPPSVKGLLVTESVRGDGGILRNSEGERFMFDYIPDYFRA
ETADTEEEADRWYDDKKNNRRPPELLPRDEVARAINSEIKAGRGSPHGGIFLDIASRRDA
DYIRKRLPSMYHQFKELADVDITAEPMEIGPTCHYVMGGVEVDPDTQESAVTGLYAAGEV
SGGMHGSNRLGGNSLSDLLVFGKRAGEAAAAYAVTSGQQGARPVIDEVDVKEAQASALAP
FDVAADASGGSENPYTIQQDLQQSMNDLVGIIRTAPELERSLEALEQLKERATRMVVEGH
RQYNPGWHLALDLRSMLLVSECIARAALARQESRGGHTRDDFPGPDPGWGAKNLVLTLDA
SGDGVDITEQALPVMPADLEQLFQDT
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgacccgacacgagatgaccggcaacgagatgtcgcccgaggcccgcggcggcatggag
cgccacacgtacgacgtcgtggtgatcggtgcgggcggcgccgggctccgggccgcgatc
gccgcgcaggaggccggcgcccggacggcggtggtctgcaagtcgctgctcggcaaggcc
cacaccgtgatggccgagggcggcgcggccgcggcgctcggcaaccggtggcccgaggac
agctggaaggtccacttccgcgacacgatgcgcggcggcaagatgctcaacaactggcgg
atggcccagctccacgcccaggaggcgccggagcgggtgctcgagctcgaggactggggc
gcgctgttcgaccgcaccgaggacgggctgatctcccagcgcgacttcggcggccaccgc
tacgcccggctggcccacgtcggcgaccgcaccgggctcgagctgatccgcaccctgcag
cagcgcaccgtgcagctcggcatcgacgtcttcatggagtgcacggtcaccgatgtcctc
aaggaggccggcgaccggcagggccgcgtggcgggcgccttcgcctactggcgcgagacc
ggccgcttcatcaccttcgaggcgcccagcgtcatcctggcgaccggcggcatcggcaag
tcctacaaggtgacgtccaactcctgggagtacaccggcgacggccacgccctcgcgctg
cgggcaggggcgagcctgatcaacatggagttcgtgcagttccacccgaccggcatggtg
tggccgccgtcggtgaagggcctgctcgtcaccgagtcggtgcgcggcgacggcggcatc
ctgcgcaactccgagggcgagcgcttcatgttcgactacatccccgactacttccgggcg
gagaccgccgacaccgaggaggaggcggaccggtggtacgacgacaagaagaacaaccgt
cggccgccggagctcctgccccgtgacgaggtggcgcgggccatcaactccgagatcaag
gccgggcgcggctcaccgcacggcggcatcttcctcgacatcgccagccgccgcgacgcc
gactacatccgcaagcggctgccctcgatgtaccaccagttcaaggagctggccgacgtc
gacatcaccgccgagccgatggagatcggcccgacctgccactacgtcatgggcggcgtc
gaggtcgaccccgacacccaggagtcggccgtgaccgggctctacgccgcgggcgaggtg
tccggcgggatgcacggctccaaccggctgggcggcaactccctctccgacctgctcgtc
ttcggcaagcgggccggcgaggccgcagcggcgtacgccgtcacctccgggcagcagggc
gcgcgtccggtgatcgacgaggtggacgtcaaggaggcgcaggcgagcgcgctggcgccg
ttcgacgtcgcagccgacgcgtcggggggctccgagaacccctacacgatccagcaggac
ctccagcagtcgatgaacgacctcgtcgggatcatccgcaccgcgccggagctcgagcgc
tcgctcgaggcgctggagcagctcaaggagcgggcgacccggatggtggtcgagggccac
cggcagtacaaccccgggtggcacctcgcgctcgacctgcgcagcatgctcctcgtcagc
gagtgcatcgcccgggccgcgctggcccgccaggagtcgcggggcgggcacacccgcgac
gacttcccggggcccgaccccgggtggggcgccaagaacctggtgctcacgctcgacgcg
tccggcgacggcgtggacatcacggagcaggcgctgccggtgatgcccgccgacctcgag
cagctcttccaggacacgtga
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