Nocardioides renjunii: SHK17_05915
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Entry
SHK17_05915 CDS
T10238
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nrn Nocardioides renjunii
Pathway
nrn03420
Nucleotide excision repair
nrn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SHK17_05915
03430 Mismatch repair
SHK17_05915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nrn03400
]
SHK17_05915
Enzymes [BR:
nrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SHK17_05915
DNA repair and recombination proteins [BR:
nrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SHK17_05915
MMR (mismatch excision repair)
Other MMR factors
SHK17_05915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WQQ23518
LinkDB
All DBs
Position
1251136..1253178
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AA seq
680 aa
AA seq
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MLEALDPEQRQVAEALRGPVRVLAGAGTGKTRAITHRIAHGVAQGVYAPTEVLALSFTTR
AAGEMRERLRRLGAPGVQARTFHSAALRQLRFFWPRVHQRDLPELTESKLGMLALAARRQ
RLSVDKATLRDLASEIEWAKVSNVGPDAYAALARSRGRAVSGLEPEVVARAFDAYEEVKR
GQGRMDMEDVLLFGAGLLADNDAVAAQVRRQYKWFVVDEFQDVSPLQHALLDLWLGGRDE
LCVVGDPAQTIYSFAGADARYLREFTHKFPTATSVELVRNYRSTPEIVTAANQLLAGTAS
KGVDLVAQRPAGARITYREATDEVAEADAVAERLAGLRAAGTPASRMAVLLRINAQSERF
EEALAARGLPYVVRGAARFFDRPEVRQAITLVRGAARSGEASGPVADSVVAVLSQMGHST
DPPEGRGEVRNRWESLQALVDLAADFGRERPDAVLGDLVDDLDRRAGEQHAPVADAVTIA
TIHSAKGLEWDAVFVAGMHEKMMPISQAQTPAEIEEERRLLYVAMTRARDELAVSWAVAR
EPGGRANRGSSPFLAPVLDGVPGVSGQRRERSKRNRAALHCRECGGALSNAREKKTGRCA
DCPASYDEALFEKLREWRLARASEDSVPAFVIFTDATLQLIAEHVPSNESGLRAISGVGP
SKISKYGDEVLALVAAESSR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgaagcgctcgatcccgagcagcgacaggtcgccgaggcgctgcgcgggccggtg
cgcgtcctcgccggcgcgggcaccggcaagacccgcgcgatcacccatcgcatcgcgcac
ggcgtcgcccagggcgtctacgcccccaccgaggtgctggcgctctcgttcaccacgcgg
gcggcgggcgagatgcgcgagcggctgcgtcgcctcggcgccccgggcgtccaggcgcgc
accttccactccgccgccctgcgccagctccggttcttctggccgcgggtccaccagcgc
gacctgcccgagctcaccgagtccaagctcggcatgctggccctggccgcgcggcgccag
cggctgagcgtggacaaggcgacgctgcgcgacctcgccagcgagatcgagtgggccaag
gtgtccaacgtcggtccggacgcctacgccgcgctggcccgctcgcgcggccgggccgtg
tcaggcctcgagcccgaggtcgtggcccgcgcgttcgacgcctacgaggaggtcaagcgc
ggccaggggcgcatggacatggaggacgtcctgctcttcggtgccggcctgctggccgac
aacgacgcggtggcggcgcaggtgcgccggcagtacaagtggttcgtcgtcgacgagttc
caggacgtctccccgctccagcacgcgctcctcgacctgtggctcggtggccgcgacgag
ctgtgcgtcgtcggtgaccccgcccagacgatctactccttcgccggcgccgacgcgcgc
tacctccgcgagttcacccacaagttccccaccgccacgagcgtcgagctggtccgcaac
taccgctcgacgccggagatcgtcaccgcggccaaccagctgctcgccggcaccgccagc
aagggcgtcgacctggtcgcccagcgacccgcgggagcgcgcatcacctaccgcgaggcg
accgacgaggtcgccgaggccgacgcggtcgccgagcgcctggcggggctgcgggccgcg
ggcacccccgccagccggatggcggtgctgctgcgcatcaacgcccagtccgagcgcttc
gaggaggcgctcgcggcgcgaggcctgccctacgtcgtgcgtggtgcggcccgcttcttc
gaccgccccgaggtgcggcaggccatcaccctggtccgcggcgccgcccgcagcggtgag
gcatccggtccggtggcggactccgtggtggcggtgctgtcccagatgggccactcgacc
gacccgcccgagggcaggggcgaggtccgcaacagatgggagtccctccaggcgctggtc
gacctggctgccgacttcggccgcgagcgccccgacgcggtcctgggcgacctcgtggac
gacctcgaccggcgtgccggcgagcagcacgccccggtcgccgacgcggtcaccatcgcc
accatccactcggccaagggcctggagtgggacgccgtcttcgtcgcgggcatgcacgag
aagatgatgccgatctcgcaggcccagacgccggccgagatcgaggaggagcggcgcctg
ctctacgtcgccatgacccgcgcccgcgacgagctcgcggtgtcctgggcggtcgcgcgc
gagcctggtggtcgggccaaccgggggagctcgcccttcctggccccggtgctcgacggg
gtgccgggcgtctccgggcagcgccgcgagcggagcaagcgcaaccgcgccgcgctccac
tgccgcgagtgcgggggcgcgctgtccaacgcccgggagaagaagaccggccggtgcgcc
gactgcccggcgtcctacgacgaggcgctgttcgagaagctgcgcgagtggcgcctggcg
cgcgcgtcggaggacagcgtgccggcgttcgtcatcttcaccgacgccaccctccagctc
atcgccgagcacgtccccagcaacgagtccggactgcgcgccatcagtggcgtgggaccg
agcaagatcagcaagtacggcgatgaggtgctcgccctggtcgccgccgagtcctctcgc
tga
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