Nocardioides renjunii: SHK17_08310
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Entry
SHK17_08310 CDS
T10238
Name
(GenBank) ThuA domain-containing protein
Organism
nrn Nocardioides renjunii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThuA
Big_9
DUF1349
GH43_C2
Cadherin_5
GSDH
Cadherin_4
CBM_6
PKD_4
PKD
K319L-like_PKD
CBM_35_2
Y_Y_Y
Big_13
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
WQQ23979
LinkDB
All DBs
Position
1715300..1721881
Genome browser
AA seq
2193 aa
AA seq
DB search
MSILRTSAARVRTSLAGLVAVAVASGGVAVAPAAAEPEAPDVAAAGTAAGAGAARSAALA
VPTYDVLVFSKTTGFRHGSIGAGIRSIKRLGAQYGFTVDATEDAGQFTAANLAQYEAVVW
LSTTSDVLDAAQQAAFEDYIQAGGGYVGVHAASDTEYTWPWYGDLVGAYFQSHPAGTPTA
TIDVEDTTTASSCALPARWERTDEWYNFQGPDNPVVNGGGTDYSPRTNGNINVIATLDES
TYVENDGNGTDDDHPIAWYQEFDGGRSFYTGGGHTDASFSEPLFRLHLLGGIQYAAGQEP
DACTAVPPTDASFEQVTLAKGVDKVGEPMSISVLPDGRVLHNARDGRIFLTDLEGNTTLL
HDVPIYSHDEDGLQSLTVSPTFEDDGWVYLYYAPPLATPTGDAPNDGTAAQFATWQGYNV
LTRMKMVDDDLVPSTEQELLRVEADRGICCHAGGAIDFDADGNLYLSTGDDSNPFASDGY
APLDERATRNPAYDAQRSAANTNDLRGKLLRITPDPTAASYSIPEGNLFDESAGTGDRTR
PEIYAMGFRNPFRMTVDKRTGYVYLGEYGPDAGGANPNRGPGGIVEFNQVREAGNFGWPY
CTGSNTPAETYNDWDFATNTTGPKFDCTAPVNNSPRNTGLTNLPPAQPAWIKYDGGNVTY
GGVTTNEFGGGGEGPMAGPVYNYDPDLESDVKFPVYFDNHFFAGEWTRGWIRDVAMDAEG
DVVGIDPFFESSTLYAAMDMEFGPDGSLYVLDYGNGGYFTGNENSAVYKINAINEGARSP
SASATATPSSGVAPLTVQFSSAGSRDPDEGDSIVGYAWDFQNDGTVDSTQPDPTFTYTAN
GVYDARLTVTDETGRTGVATAVVTVGNTRPTVEIDLPPDGGFFEFGDSVRVKVTVTDPED
GTVDCSKVEIDYILGHDSHGHPLSSRTGCDVVLPTVQDQGHDASADIFGVINASYTDGGA
GSIPALIGEDEVVLQPKRKQAEHYDSQQGVATEATTDPLGGSSNLSNIDAGDHVSYRPIS
LSQVPRLRFRVASAGAGGTIEARLDSPTGPLAGSVTVPVTGGWQQWQFVDMDIAPSAQEG
SHELFLVFTNPDPTATGLFNLNFFDAAGKGVSVNSKPQVGAQGTPTQGTAPLTVDFTGSA
SDFDGDQLTYQWDFGAPGAGDTATTLDAEYTYTEPGTYTARLSATDPSGATGYATVPVRV
LSSCGVQQSDEFDGTTLDGKWDVIRDSGDWSVADGGLRVPISSGSLYGPGGNAEDIIVQR
APDGAFQVTAKVTADVSENYHQAGLRLYSDDENWASVHLISAGGNRDVEFIYEAQGSPRN
NAEDKLGGVPVGFPTTYYVRLTSDGTDLRASYSADGQTFSPVGRPAPMSTLADPKIGPAA
VSGGATSSPTATFDWIRFDPDGTSGSTDPTDEFDGAELDGCRWNASVREDPSRHEVAGGA
LTITTTGGDLYQTSDPSGTTNLLLQSDAGTTEDYTLETRVSTTFTDGYAQAGLLVYGDDD
NYVKLDPISDTNAGRINRVELRSESNAAILNPQPELAAPANVTSYRLRLTKVGTSYTGEV
AFDGGDWQPIGTVTNPTADMDFGLFAIGVQQPGRTATFDYFRVTPAAAANRTPVADDDAA
ITTAGSAVRISVLAGDTDPDGDPLTVESVTDPAGGSATLAPGGTVRYAPDDGFAGSDTFD
YTVADGQGGTDTGTVTVTVTEACDLETPDDTFEGDALDTCRWNAVVAGDPTKRRVADGRL
FVTTTPGEIYQSGTGKSNLVMQSADHAGEDWTLETHADVSSLDGGYSQAGLMAYGDDANY
VKVVVIADDGRTAPNRVELRSEVDNAIVGTNPQPELAIPAGTDLTDMRLRLTKAGTAYSG
AASFDGGATWVDLPRAVDNAMVDPRFGIFAAGVVQEGDEVSFDAFLVDGVDPVDPVNTAP
VAVDDAATTPQGTAVAVPVLANDTDADSDDELSVTSVTSPAHGTAVVAADGTVTYTPTSG
YAGGDSFDYVVSDGEDTDTGTVTVTVTRVAQPTPDTRITSAPRGTTRATTAVIRFTATGP
GAGAATFECSLDGSAFTACPSPRTYRDLRDGEHVVRVRAVGPDGADPTPATVTWTVDNTG
PRVRALTPTGTTRDRTPEVGATVTDARSSVRGRSLALSIDGKRVDGVRFDARRDRMTWLP
ERALARGRHTVRLVVEDALGNRTVTTWRFTVRR
NT seq
6582 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcctccgcacctcggcagcacgcgtccggacgtcactcgcagggctggtggcg
gtggcggtggcgagcggtggcgtggccgtcgcccctgccgccgccgaaccggaggcgccc
gacgtcgcggcggcgggaaccgcggccggcgctggagccgcccggtccgccgccctggcg
gtgccgacctacgacgtcctcgtcttcagcaagaccaccggcttccgccacggatcgatc
ggtgccggcatccgctcgatcaagaggctcggcgcccagtacggcttcaccgtcgacgcc
accgaggacgccgggcagttcaccgccgccaacctcgcgcagtacgaggcggtcgtctgg
ctctcgacgaccagcgacgtgctcgacgccgcccagcaggcggcgttcgaggactacatc
caggccggtggcggctacgtcggcgtccacgcggcctccgacaccgagtacacctggccc
tggtacggcgacctcgtcggcgcctacttccagagccacccggccggcacccccaccgcc
acgatcgacgtggaggacaccaccacggcctcctcctgcgcgttgccggcgcgctgggag
cgcaccgacgagtggtacaacttccagggcccggacaacccggtggtcaacggcggtggc
accgactacagcccccggaccaacggcaacatcaacgtgatcgcgacgctcgacgagtcc
acctacgtcgagaacgacggcaacggcaccgacgacgaccacccgatcgcgtggtaccag
gagttcgacggcggccgcagcttctacaccggcggcggccacacggacgcgtccttctcc
gagccgctgttccgcctgcacctcctcggcggcatccagtacgccgccggccaggagccc
gacgcgtgcacggccgtgcctcccacggacgcgtcgttcgagcaggtcaccctcgccaag
ggcgtcgacaaggtcggcgagccgatgagcatctcggtgctgcccgacgggcgggtcctg
cacaacgcccgcgacggccggatcttcctgaccgacctcgagggcaacacgaccctcctg
cacgacgtcccgatctactcccacgacgaggacgggctgcagagcctcacggtgagcccg
accttcgaggacgacggctgggtctacctctactacgccccgccgctggcgacgccgacc
ggtgacgcccccaacgacggcaccgccgcgcagttcgccacctggcagggctacaacgtc
ctgacccggatgaagatggtcgacgacgacctcgtgccctcgaccgagcaggagctgctg
cgggtcgaggccgaccgggggatctgctgccacgccggtggggccatcgacttcgacgcc
gacggcaacctctacctgtccaccggcgacgactcgaacccgttcgcctcggacggctac
gcgccgctcgacgagcgagccacccgcaacccggcgtacgacgcacagcgcagcgcagcc
aacaccaacgacctgcgcggcaagctgctgcgcatcacccccgacccgaccgcggcgtcg
tactcgatcccggagggcaacctcttcgacgagtcggccggcaccggggaccggacgcgc
ccggagatctacgcgatgggcttccgcaacccgttccggatgaccgtcgacaagcggacc
ggctacgtctacctcggcgagtacggcccggacgccggtggcgccaaccccaaccgcggc
cccggcggcatcgtggagttcaaccaggtccgcgaggcgggcaacttcggctggccctac
tgcacgggcagcaacaccccggccgagacctacaacgactgggacttcgcgaccaacacc
accggccccaagttcgactgcacggcgccggtcaacaacagcccgcgcaacaccggcctg
accaacctgccgccggcccagcccgcgtggatcaagtacgacggcggcaacgtcacctac
ggcggcgtcaccaccaacgagttcggcggcggcggcgagggcccgatggccggcccggtc
tacaactacgaccccgacctcgagtccgacgtgaagttccccgtgtacttcgacaaccac
ttcttcgccggtgagtggacgcgcggctggatccgcgacgtcgcgatggacgccgagggc
gacgtggtgggcatcgaccccttcttcgagtcctcgacgctctacgccgccatggacatg
gagttcggccccgacggctcgctctacgtcctcgactacggcaacggcggctacttcacc
ggcaacgagaactcggccgtctacaagatcaacgccatcaacgagggcgcccgctcgccg
tcggcgtccgccaccgccacgcccagctcgggagtggccccgctgacggtgcagttctcg
agcgccgggtcgcgcgaccccgacgagggcgactcgatcgtcggctacgcctgggacttc
cagaacgacggcacggtcgactccacgcagcccgacccgacgttcacctacaccgccaac
ggcgtctacgacgcccgcctcacggtgaccgacgagaccggccggaccggcgtggccacg
gcggtcgtcaccgtcggcaacacgcggccgacggtcgagatcgacctgccgcccgacggc
gggttcttcgagttcggcgactccgtgcgggtcaaggtcacggtgaccgaccccgaggac
gggaccgtcgactgctccaaggtcgagatcgactacatcctcggccacgactcgcacggg
cacccgctcagctcgcgcaccgggtgcgacgtcgtcctgccgaccgtgcaggaccagggc
cacgacgcctcggccgacatcttcggggtgatcaacgccagctacaccgacggcggcgcc
gggagcatccccgcgctcatcggtgaggacgaggtcgtcctgcagcccaagcgcaagcag
gccgagcactacgactcgcagcagggggtcgccaccgaggccaccaccgacccgctcggg
gggtccagcaacctgtccaacatcgacgccggcgaccacgtgtcctaccggccgatcagc
ctctcgcaggtgccgaggctgcggttccgggtcgcgtccgccggcgccgggggcaccatc
gaggcccgcctcgacagcccgacagggccgctcgccggatcggtcaccgtgccggtgacc
ggcggctggcagcagtggcagttcgtcgacatggacatcgcaccgtcggcgcaggagggc
tcgcacgagctgttcctcgtcttcaccaaccccgacccgacggccaccggcctgttcaac
ctcaacttcttcgacgcggccggcaagggtgtctcggtcaactccaagccccaggtcggc
gcccagggcacgcccacgcagggcaccgctccgctcaccgtcgacttcaccggctccgcg
tccgacttcgacggtgaccagctcacctaccagtgggacttcggtgccccgggcgccggc
gacacggccaccaccctcgacgccgagtacacctacacggagcccggcacctacaccgcc
cgcctgagcgcgaccgacccctctggggccaccggctacgcgacggtccccgtccgggtg
ctgagctcgtgcggtgtccagcagtccgacgagttcgacggcacgacgctcgacggcaag
tgggacgtcatccgcgacagcggcgactggagcgtcgccgacggcgggctccgggtgccg
atcagcagcggcagcctctacgggcccggcggcaacgcggaggacatcatcgtgcagcgg
gcgcccgacggtgcgttccaggtgaccgccaaggtcaccgccgacgtgagcgagaactac
caccaggccggtctgcgcctctactccgacgacgagaactgggcctcggtccacctcatc
tcggccgggggcaaccgcgacgtcgagttcatctacgaggcgcagggctcgccccgcaac
aacgcggaggacaagctcggtggcgtccccgtcggcttcccgaccacctactacgtgcgg
ctgacgtccgacgggaccgacctgcgggcgtcgtactccgcggacggccagacgttctcg
cccgtcggacggccggcgccgatgagcaccctggccgacccgaagatcggtccggccgcc
gtctccggtggcgcgacgtccagcccgacggcgacgttcgactggatccgcttcgacccc
gacggcacgagcggctcgaccgacccgaccgacgagttcgacggggccgagctcgacggc
tgccggtggaacgcctccgtgcgcgaggacccctcgcgccacgaggtggccggcggtgcg
ctgacgatcaccacgacaggaggagacctctaccagacctcggacccctccggcacgacg
aacctgctcctgcagtcggacgccggcacgaccgaggactacaccctcgagacgcgggtc
tccacgaccttcaccgacggctacgcccaggcgggcctgctcgtctacggcgacgacgac
aactacgtcaagctcgaccccatctccgacaccaacgccggacgcattaaccgggtggag
ctgcgctcggagtcgaacgccgcgatcctcaacccgcagcccgagctggccgccccggcc
aacgtgacgtcgtaccggctccggctcacgaaggtgggcaccagctacaccggtgaggtc
gcgttcgacggcggtgactggcagcccatcggcaccgtgaccaacccgacggccgacatg
gacttcggtctcttcgccatcggggtgcagcagcccggccggaccgcgacgttcgactac
ttccgggtcaccccggcggcagccgcgaaccgcacgccggtcgccgacgacgacgcggcg
atcaccacggcggggagcgcggtgaggatctcggtcctggccggcgacaccgacccggac
ggcgaccccctcaccgtcgagtcggtcaccgatcccgccggcggcagcgccacgctcgcc
cccggaggcacggtccgctacgcacccgacgatggcttcgccggcagcgacacgttcgac
tacaccgtcgccgacggccagggcggcaccgacacgggcaccgtcaccgtgacggtgacc
gaggcctgcgacctggagacgccggacgacaccttcgagggcgacgccctcgacacgtgc
cgctggaacgccgtggtggcgggtgacccgaccaagcgccgggtcgccgacggccgcctg
ttcgtgaccacgacgccgggcgagatctaccagtccgggaccggcaagtcgaacctcgtc
atgcagtccgccgaccacgccggcgaggactggacgctcgagacccacgccgacgtctcg
tccctcgacggcggctacagccaggcgggtctgatggcctacggcgacgacgccaactac
gtcaaggtcgtggtcatcgccgacgacggcaggacggcccccaaccgggtcgagctgcgg
tcggaggtcgacaacgccatcgtcgggacgaacccgcagccggagctggcgatccccgcc
ggcaccgacctgaccgacatgcggctccgcctgaccaaggccggcacggcctactcgggt
gcggcgtcgttcgacggtggtgcgacgtgggtcgacctgccgcgggcggtcgacaacgcg
atggtcgacccgcgcttcggcatcttcgccgcgggagtggtgcaggagggcgacgaggtc
tccttcgacgccttcctcgtcgacggcgtggacccggtcgacccggtcaacacggcgccg
gtcgctgtcgacgacgcggcgaccacgccgcagggcaccgccgtcgccgtcccggtgctg
gccaacgacaccgacgccgactccgacgacgagctctccgtgacgtcggtgacgtcgcct
gcacacggcaccgctgtcgtggccgccgacgggacggtgacctacaccccgaccagcggc
tacgcgggcggtgactcgttcgactacgtcgtcagcgacggtgaggacaccgacaccgga
accgtcaccgtgaccgtcacccgggtcgcgcagcccactccggacacccggatcacctcg
gcgccgcgcggcaccacccgggccaccacggcggtcatccggttcacggccaccggcccc
ggtgccggggcggcgaccttcgagtgctcactcgatgggtccgccttcacagcgtgcccc
tcgccccggacctaccgcgacctgcgcgacggtgagcacgtggtgcgggtgcgcgcggtc
ggccccgacggtgccgacccgacgccggcgacggtgacctggacggtcgacaacaccggc
ccgcgggtgcgggcactcaccccgaccggcacgacccgcgaccgtacgcccgaggtcggt
gcgaccgtcacggacgcgcggtcgtcggtgcgcggccggtcgctggcgctgtcgatcgac
ggcaagcgggtcgacggcgtgcgcttcgacgcgcgccgggaccggatgacgtggctgccc
gagcgcgccctggctcgcggccggcacactgtgcgcctcgtcgtcgaggacgcgctcggc
aaccggaccgtcaccacctggaggttcaccgtccggcgctga
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